54 items (Drosophila virilis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DvirGJ19830	Ephrin RBD domain-containing protein; Belongs to the ephrin family. (682 aa)
	DvirGJ21311	Uncharacterized protein, isoform B. (1127 aa)
	DVIR88_6g0016	Uncharacterized protein. (1095 aa)
	DvirGJ20828	Uncharacterized protein, isoform B. (1183 aa)
	Dscam	Dscam, isoform L. (2086 aa)
	DvirGJ23856	Uncharacterized protein, isoform C. (754 aa)
	DvirGJ22286	Uncharacterized protein, isoform C. (210 aa)
	DvirGJ26245	Uncharacterized protein. (625 aa)
	DvirGJ19504	Uncharacterized protein, isoform C. (882 aa)
	DvirGJ23538	Uncharacterized protein, isoform E. (486 aa)
	DvirGJ13751	Uncharacterized protein. (1005 aa)
	DvirGJ16233	Uncharacterized protein, isoform D. (988 aa)
	DvirGJ12575	Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family. (1077 aa)
	DvirGJ12838	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (945 aa)
	DvirGJ11297	Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Belongs to the glycosyltransferase 43 family. (468 aa)
	DvirGJ11295	HECT domain-containing protein. (1040 aa)
	DvirGJ11823	Uncharacterized protein. (559 aa)
	DvirGJ13109	POU domain protein. (742 aa)
	DvirGJ13209	Uncharacterized protein. (192 aa)
	DvirGJ11496	Homeobox domain-containing protein. (705 aa)
	DvirGJ13849	TIR domain-containing protein. (1365 aa)
	DvirGJ12704	Uncharacterized protein. (2290 aa)
	DvirGJ13308	Uncharacterized protein. (630 aa)
	DvirGJ20887	Uncharacterized protein, isoform A. (851 aa)
	DvirGJ20064	Uncharacterized protein. (198 aa)
	DvirGJ20054	Receptor protein-tyrosine kinase. (1438 aa)
	DvirGJ21732	Uncharacterized protein. (1380 aa)
	DVIR88_6g0063	Ephrin RBD domain-containing protein; Belongs to the ephrin family. (684 aa)
	DvirGJ19907	Small nuclear ribonucleoprotein Sm D3. (151 aa)
	DvirGJ23560	Uncharacterized protein, isoform A. (666 aa)
	DvirGJ23481	Uncharacterized protein. (1005 aa)
	pros	Pros. (1911 aa)
	DvirGJ24543	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (898 aa)
	DvirGJ22545	Homeobox domain-containing protein. (641 aa)
	DvirGJ23100	Uncharacterized protein. (656 aa)
	DvirGJ19212	Homeobox protein cut-like. (2376 aa)
	DvirGJ19256	SSD domain-containing protein. (1254 aa)
	DvirGJ14241	Uncharacterized protein, isoform A. (1095 aa)
	neur	Neuralized, isoform C. (749 aa)
	abd-A	Abd-A, isoform A. (530 aa)
	DvirGJ16504	Uncharacterized protein, isoform A. (458 aa)
	DvirGJ18005	Uncharacterized protein, isoform A. (949 aa)
	DvirGJ17903	Uncharacterized protein, isoform B; Belongs to the cyclin family. (698 aa)
	DvirGJ15726	Uncharacterized protein, isoform A. (374 aa)
	DvirGJ15917	Homeobox domain-containing protein. (374 aa)
	DvirGJ15598	BHLH domain-containing protein. (602 aa)
	DvirGJ15597	Uncharacterized protein, isoform A. (284 aa)
	sc	Scute. (351 aa)
	ac	Achaete. (208 aa)
	DvirGJ14448	Uncharacterized protein. (780 aa)
	DvirGJ15299	Uncharacterized protein. (2757 aa)
	DvirGJ16232	Uncharacterized protein, isoform A. (697 aa)
	DvirGJ16299	Uncharacterized protein, isoform C. (411 aa)
	DvirGJ18662	Uncharacterized protein. (885 aa)

Your Current Organism:

Drosophila virilis

NCBI taxonomy Id: 7244
Other names: D. virilis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DVIR88_6g0016	DVIR88_6g0063	D0Z7B1	D0Z7A3	Uncharacterized protein.	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	0.871
DVIR88_6g0016	DvirGJ12704	D0Z7B1	B4LGX6	Uncharacterized protein.	Uncharacterized protein.	0.444
DVIR88_6g0016	DvirGJ13209	D0Z7B1	B4LG76	Uncharacterized protein.	Uncharacterized protein.	0.443
DVIR88_6g0016	DvirGJ19830	D0Z7B1	B4MF00	Uncharacterized protein.	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	0.871
DVIR88_6g0063	DVIR88_6g0016	D0Z7A3	D0Z7B1	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	Uncharacterized protein.	0.871
DVIR88_6g0063	DvirGJ14241	D0Z7A3	B4MF10	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	Uncharacterized protein, isoform A.	0.871
DvirGJ11496	DvirGJ15726	B4LGH0	B4MA61	Homeobox domain-containing protein.	Uncharacterized protein, isoform A.	0.555
DvirGJ11496	DvirGJ15917	B4LGH0	B4MAH8	Homeobox domain-containing protein.	Homeobox domain-containing protein.	0.555
DvirGJ11823	ac	B4LDL3	B4MAV2	Uncharacterized protein.	Achaete.	0.464
DvirGJ11823	sc	B4LDL3	B4MAV0	Uncharacterized protein.	Scute.	0.483
DvirGJ12704	DVIR88_6g0016	B4LGX6	D0Z7B1	Uncharacterized protein.	Uncharacterized protein.	0.444
DvirGJ12704	DvirGJ13209	B4LGX6	B4LG76	Uncharacterized protein.	Uncharacterized protein.	0.934
DvirGJ12704	DvirGJ14241	B4LGX6	B4MF10	Uncharacterized protein.	Uncharacterized protein, isoform A.	0.444
DvirGJ12704	DvirGJ15299	B4LGX6	B4MCT2	Uncharacterized protein.	Uncharacterized protein.	0.538
DvirGJ12704	DvirGJ20064	B4LGX6	B4LLE0	Uncharacterized protein.	Uncharacterized protein.	0.934
DvirGJ12704	DvirGJ22286	B4LGX6	A0A0Q9WFZ7	Uncharacterized protein.	Uncharacterized protein, isoform C.	0.934
DvirGJ12838	DvirGJ20064	B4LBP7	B4LLE0	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.511
DvirGJ12838	DvirGJ22286	B4LBP7	A0A0Q9WFZ7	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein, isoform C.	0.511
DvirGJ13209	DVIR88_6g0016	B4LG76	D0Z7B1	Uncharacterized protein.	Uncharacterized protein.	0.443
DvirGJ13209	DvirGJ12704	B4LG76	B4LGX6	Uncharacterized protein.	Uncharacterized protein.	0.934