15 items (Drosophila virilis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DvirGJ16028	Uncharacterized protein, isoform A. (267 aa)
	DVIR88_6g0043	Uncharacterized protein. (3494 aa)
	DvirGJ15864	Uncharacterized protein. (745 aa)
	DvirGJ10268	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (612 aa)
	DvirGJ24526	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (212 aa)
	DvirGJ23460	SNAPIN protein homolog; Component of the biogenesis of lysosome-related organelles complex-1 (BLOC-1) involved in pigment granule biogenesis. (136 aa)
	DvirGJ20485	Uncharacterized protein. (304 aa)
	DvirGJ21482	t-SNARE coiled-coil homology domain-containing protein. (280 aa)
	DvirGJ11580	Uncharacterized protein. (292 aa)
	DvirGJ12527	Uncharacterized protein, isoform A. (1357 aa)
	DvirGJ26586	C2 domain-containing protein. (98 aa)
	DvirGJ18433	Uncharacterized protein, isoform F. (3497 aa)
	DvirGJ11142	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (213 aa)
	DvirGJ15999	Uncharacterized protein, isoform B; Belongs to the STXBP/unc-18/SEC1 family. (602 aa)
	DvirGJ14275	Uncharacterized protein. (750 aa)

Your Current Organism:

Drosophila virilis

NCBI taxonomy Id: 7244
Other names: D. virilis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DVIR88_6g0043	DvirGJ11142	D0Z7E8	A0A0Q9WJA9	Uncharacterized protein.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.620
DVIR88_6g0043	DvirGJ15999	D0Z7E8	A0A0Q9WEV9	Uncharacterized protein.	Uncharacterized protein, isoform B; Belongs to the STXBP/unc-18/SEC1 family.	0.770
DVIR88_6g0043	DvirGJ21482	D0Z7E8	B4LIY7	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.436
DVIR88_6g0043	DvirGJ24526	D0Z7E8	B4LYY2	Uncharacterized protein.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.620
DvirGJ10268	DvirGJ11580	B4M4B7	B4LFP5	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	Uncharacterized protein.	0.778
DvirGJ10268	DvirGJ15999	B4M4B7	A0A0Q9WEV9	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	Uncharacterized protein, isoform B; Belongs to the STXBP/unc-18/SEC1 family.	0.614
DvirGJ11142	DVIR88_6g0043	A0A0Q9WJA9	D0Z7E8	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	Uncharacterized protein.	0.620
DvirGJ11142	DvirGJ11580	A0A0Q9WJA9	B4LFP5	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	Uncharacterized protein.	0.875
DvirGJ11142	DvirGJ14275	A0A0Q9WJA9	B4MBN1	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	Uncharacterized protein.	0.727
DvirGJ11142	DvirGJ15864	A0A0Q9WJA9	B4MA92	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	Uncharacterized protein.	0.727
DvirGJ11142	DvirGJ15999	A0A0Q9WJA9	A0A0Q9WEV9	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	Uncharacterized protein, isoform B; Belongs to the STXBP/unc-18/SEC1 family.	0.910
DvirGJ11142	DvirGJ18433	A0A0Q9WJA9	A0A0Q9WL55	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	Uncharacterized protein, isoform F.	0.620
DvirGJ11142	DvirGJ23460	A0A0Q9WJA9	B4LUU5	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	SNAPIN protein homolog; Component of the biogenesis of lysosome-related organelles complex-1 (BLOC-1) involved in pigment granule biogenesis.	0.536
DvirGJ11580	DvirGJ10268	B4LFP5	B4M4B7	Uncharacterized protein.	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	0.778
DvirGJ11580	DvirGJ11142	B4LFP5	A0A0Q9WJA9	Uncharacterized protein.	Synaptosomal-associated protein; Belongs to the SNAP-25 family.	0.875
DvirGJ11580	DvirGJ14275	B4LFP5	B4MBN1	Uncharacterized protein.	Uncharacterized protein.	0.958
DvirGJ11580	DvirGJ15864	B4LFP5	B4MA92	Uncharacterized protein.	Uncharacterized protein.	0.958
DvirGJ11580	DvirGJ15999	B4LFP5	A0A0Q9WEV9	Uncharacterized protein.	Uncharacterized protein, isoform B; Belongs to the STXBP/unc-18/SEC1 family.	0.620
DvirGJ11580	DvirGJ20485	B4LFP5	B4LNF6	Uncharacterized protein.	Uncharacterized protein.	0.951
DvirGJ11580	DvirGJ21482	B4LFP5	B4LIY7	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.863