35 items (Drosophila virilis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DvirGJ19163	Uncharacterized protein. (256 aa)
	DvirGJ24126	Uncharacterized protein. (592 aa)
	DvirGJ23092	Mothers against decapentaplegic homolog. (769 aa)
	DvirGJ23100	Uncharacterized protein. (656 aa)
	DvirGJ22944	Uncharacterized protein. (1012 aa)
	DvirGJ17774	Uncharacterized protein. (710 aa)
	DvirGJ11838	CBFD_NFYB_HMF domain-containing protein. (202 aa)
	DvirGJ11880	Uncharacterized protein. (608 aa)
	DvirGJ20103	HDAC_interact domain-containing protein. (2097 aa)
	DvirGJ11550	SWIRM domain-containing protein. (900 aa)
	Nelf-E	Nelf-E. (281 aa)
	DvirGJ13627	Uncharacterized protein. (503 aa)
	DvirGJ13506	Uncharacterized protein. (219 aa)
	DvirGJ11265	DIRP domain-containing protein. (486 aa)
	DvirGJ14058	PWWP domain-containing protein. (147 aa)
	DvirGJ13411	Uncharacterized protein. (145 aa)
	DvirGJ12607	Uncharacterized protein. (840 aa)
	DvirGJ19553	Mothers against decapentaplegic homolog. (510 aa)
	DvirGJ17675	Uncharacterized protein. (2620 aa)
	DvirGJ15743	Uncharacterized protein, isoform D. (885 aa)
	DvirGJ16605	SANT domain-containing protein. (2899 aa)
	Rpd3	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (527 aa)
	DvirGJ14999	Uncharacterized protein. (122 aa)
	DvirGJ19663	Uncharacterized protein. (265 aa)
	DvirGJ19756	CBFD_NFYB_HMF domain-containing protein. (350 aa)
	DvirGJ14299	HDAg domain-containing protein. (1323 aa)
	DvirGJ15676	Uncharacterized protein. (570 aa)
	DvirGJ16785	DIRP domain-containing protein. (1025 aa)
	DvirGJ16434	Uncharacterized protein. (138 aa)
	DvirGJ17007	NTF2 domain-containing protein. (135 aa)
	DvirGJ17006	NTF2 domain-containing protein. (138 aa)
	DvirGJ17005	NTF2 domain-containing protein. (135 aa)
	DvirGJ17003	NTF2 domain-containing protein. (133 aa)
	DvirGJ10441	Uncharacterized protein. (689 aa)
	DvirGJ19362	Uncharacterized protein. (578 aa)

Your Current Organism:

Drosophila virilis

NCBI taxonomy Id: 7244
Other names: D. virilis

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DvirGJ10441	DvirGJ11550	B4M678	B4LG07	Uncharacterized protein.	SWIRM domain-containing protein.	0.623
DvirGJ11265	DvirGJ13411	B4LCQ0	B4LBE8	DIRP domain-containing protein.	Uncharacterized protein.	0.884
DvirGJ11265	DvirGJ16434	B4LCQ0	B4M7K5	DIRP domain-containing protein.	Uncharacterized protein.	0.884
DvirGJ11265	DvirGJ19663	B4LCQ0	B4MCQ1	DIRP domain-containing protein.	Uncharacterized protein.	0.617
DvirGJ11550	DvirGJ10441	B4LG07	B4M678	SWIRM domain-containing protein.	Uncharacterized protein.	0.623
DvirGJ11550	DvirGJ13627	B4LG07	B4LEF2	SWIRM domain-containing protein.	Uncharacterized protein.	0.623
DvirGJ11550	DvirGJ14058	B4LG07	B4LCP9	SWIRM domain-containing protein.	PWWP domain-containing protein.	0.502
DvirGJ11550	DvirGJ15743	B4LG07	A0A0Q9WD41	SWIRM domain-containing protein.	Uncharacterized protein, isoform D.	0.993
DvirGJ11550	DvirGJ20103	B4LG07	B4LL09	SWIRM domain-containing protein.	HDAC_interact domain-containing protein.	0.559
DvirGJ11550	Rpd3	B4LG07	B4MFY7	SWIRM domain-containing protein.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.910
DvirGJ11838	DvirGJ19756	B4LRY7	B4MCL4	CBFD_NFYB_HMF domain-containing protein.	CBFD_NFYB_HMF domain-containing protein.	0.993
DvirGJ11880	DvirGJ16605	B4LRY1	A0A0Q9W733	Uncharacterized protein.	SANT domain-containing protein.	0.845
DvirGJ11880	DvirGJ17774	B4LRY1	B4LTL0	Uncharacterized protein.	Uncharacterized protein.	0.666
DvirGJ11880	DvirGJ20103	B4LRY1	B4LL09	Uncharacterized protein.	HDAC_interact domain-containing protein.	0.468
DvirGJ11880	DvirGJ22944	B4LRY1	B4LWM4	Uncharacterized protein.	Uncharacterized protein.	0.994
DvirGJ11880	DvirGJ23092	B4LRY1	B4M0Z7	Uncharacterized protein.	Mothers against decapentaplegic homolog.	0.472
DvirGJ11880	Rpd3	B4LRY1	B4MFY7	Uncharacterized protein.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.966
DvirGJ12607	DvirGJ17003	B4LB38	B4M7K0	Uncharacterized protein.	NTF2 domain-containing protein.	0.834
DvirGJ12607	DvirGJ17005	B4LB38	B4M7K1	Uncharacterized protein.	NTF2 domain-containing protein.	0.834
DvirGJ12607	DvirGJ17006	B4LB38	B4M7K2	Uncharacterized protein.	NTF2 domain-containing protein.	0.834