43 items (Drosophila virilis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DvirGJ22164	Tyrosinase_Cu-bd domain-containing protein. (688 aa)
	DvirGJ22146	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family. (459 aa)
	DvirGJ12003	Uncharacterized protein. (3723 aa)
	DvirGJ11395	Uncharacterized protein. (150 aa)
	DvirGJ13345	Uncharacterized protein. (418 aa)
	DvirGJ13209	Uncharacterized protein. (192 aa)
	DvirGJ11597	Uncharacterized protein, isoform C. (852 aa)
	DvirGJ12360	Uncharacterized protein. (192 aa)
	DvirGJ14095	VPS9 domain-containing protein. (1480 aa)
	DvirGJ13537	Uncharacterized protein. (787 aa)
	DvirGJ20621	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (1107 aa)
	DvirGJ22286	Uncharacterized protein, isoform C. (210 aa)
	DvirGJ12042	Uncharacterized protein. (2049 aa)
	DvirGJ17528	Uncharacterized protein, isoform C. (597 aa)
	DvirGJ26245	Uncharacterized protein. (625 aa)
	DvirGJ18997	Uncharacterized protein, isoform C. (1016 aa)
	DvirGJ14081	Uncharacterized protein, isoform A. (1247 aa)
	DVIR88_6g0016	Uncharacterized protein. (1095 aa)
	DVIR88_6g0063	Ephrin RBD domain-containing protein; Belongs to the ephrin family. (684 aa)
	DvirGJ14117	Uncharacterized protein; Belongs to the band 7/mec-2 family. Flotillin subfamily. (110 aa)
	DvirGJ16097	Uncharacterized protein, isoform B. (3530 aa)
	DvirGJ15405	Cyclin-dependent kinase 5 activator. (446 aa)
	DvirGJ15472	Uncharacterized protein, isoform C. (4643 aa)
	DvirGJ14241	Uncharacterized protein, isoform A. (1095 aa)
	DvirGJ19830	Ephrin RBD domain-containing protein; Belongs to the ephrin family. (682 aa)
	DvirGJ16232	Uncharacterized protein, isoform A. (697 aa)
	DvirGJ16211	Uncharacterized protein, isoform A; Belongs to the DOCK family. (2055 aa)
	DvirGJ19684	Uncharacterized protein, isoform A. (1464 aa)
	DvirGJ14460	CLIP domain-containing serine protease; Belongs to the peptidase S1 family. CLIP subfamily. (396 aa)
	DvirGJ16615	Uncharacterized protein, isoform A; Belongs to the band 7/mec-2 family. Flotillin subfamily. (405 aa)
	DvirGJ16904	Protein kinase domain-containing protein. (1259 aa)
	DvirGJ10747	Uncharacterized protein, isoform A. (251 aa)
	DvirGJ10951	CLIP domain-containing serine protease; Belongs to the peptidase S1 family. CLIP subfamily. (386 aa)
	DvirGJ18818	Uncharacterized protein, isoform B. (1235 aa)
	DvirGJ23847	Uncharacterized protein. (185 aa)
	DvirGJ15962	Uncharacterized protein, isoform B. (256 aa)
	DvirGJ23751	Integrin beta. (791 aa)
	DvirGJ17693	Uncharacterized protein. (1092 aa)
	DvirGJ21412	SERPIN domain-containing protein; Belongs to the serpin family. (456 aa)
	DvirGJ21884	Mitogen-activated protein kinase. (369 aa)
	DvirGJ21207	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (294 aa)
	DvirGJ21181	Tyrosinase_Cu-bd domain-containing protein. (684 aa)
	DvirGJ20064	Uncharacterized protein. (198 aa)

Your Current Organism:

Drosophila virilis

NCBI taxonomy Id: 7244
Other names: D. virilis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DVIR88_6g0016	DVIR88_6g0063	D0Z7B1	D0Z7A3	Uncharacterized protein.	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	0.871
DVIR88_6g0016	DvirGJ12360	D0Z7B1	B4LDX8	Uncharacterized protein.	Uncharacterized protein.	0.443
DVIR88_6g0016	DvirGJ13209	D0Z7B1	B4LG76	Uncharacterized protein.	Uncharacterized protein.	0.443
DVIR88_6g0016	DvirGJ15962	D0Z7B1	A0A0Q9WDC0	Uncharacterized protein.	Uncharacterized protein, isoform B.	0.528
DVIR88_6g0016	DvirGJ17528	D0Z7B1	A0A0Q9WKS1	Uncharacterized protein.	Uncharacterized protein, isoform C.	0.484
DVIR88_6g0016	DvirGJ18997	D0Z7B1	A0A0Q9WPB7	Uncharacterized protein.	Uncharacterized protein, isoform C.	0.413
DVIR88_6g0016	DvirGJ19830	D0Z7B1	B4MF00	Uncharacterized protein.	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	0.871
DVIR88_6g0016	DvirGJ23751	D0Z7B1	B4LUM4	Uncharacterized protein.	Integrin beta.	0.423
DVIR88_6g0016	DvirGJ23847	D0Z7B1	B4LY33	Uncharacterized protein.	Uncharacterized protein.	0.443
DVIR88_6g0063	DVIR88_6g0016	D0Z7A3	D0Z7B1	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	Uncharacterized protein.	0.871
DVIR88_6g0063	DvirGJ14241	D0Z7A3	B4MF10	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	Uncharacterized protein, isoform A.	0.871
DvirGJ12003	DvirGJ23751	B4LI83	B4LUM4	Uncharacterized protein.	Integrin beta.	0.942
DvirGJ12042	DvirGJ12360	A0A0Q9WIX8	B4LDX8	Uncharacterized protein.	Uncharacterized protein.	0.417
DvirGJ12042	DvirGJ13209	A0A0Q9WIX8	B4LG76	Uncharacterized protein.	Uncharacterized protein.	0.417
DvirGJ12042	DvirGJ13537	A0A0Q9WIX8	B4LD64	Uncharacterized protein.	Uncharacterized protein.	0.408
DvirGJ12042	DvirGJ14095	A0A0Q9WIX8	B4LD91	Uncharacterized protein.	VPS9 domain-containing protein.	0.473
DvirGJ12042	DvirGJ15962	A0A0Q9WIX8	A0A0Q9WDC0	Uncharacterized protein.	Uncharacterized protein, isoform B.	0.417
DvirGJ12042	DvirGJ20064	A0A0Q9WIX8	B4LLE0	Uncharacterized protein.	Uncharacterized protein.	0.616
DvirGJ12042	DvirGJ22286	A0A0Q9WIX8	A0A0Q9WFZ7	Uncharacterized protein.	Uncharacterized protein, isoform C.	0.616
DvirGJ12042	DvirGJ23847	A0A0Q9WIX8	B4LY33	Uncharacterized protein.	Uncharacterized protein.	0.417