59 items (Drosophila virilis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DvirGJ21832	Uncharacterized protein. (259 aa)
	DvirGJ14400	Nucleoplasmin domain-containing protein. (154 aa)
	DvirGJ11194	Ribosomal_L16 domain-containing protein. (218 aa)
	DvirGJ15381	Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (479 aa)
	DvirGJ15389	Protein MAK16 homolog; Belongs to the MAK16 family. (348 aa)
	DvirGJ18081	SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (840 aa)
	DvirGJ18392	Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (5496 aa)
	DvirGJ17587	Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (718 aa)
	DvirGJ15847	Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. (831 aa)
	DvirGJ17944	Uncharacterized protein. (252 aa)
	DvirGJ18198	Uncharacterized protein. (573 aa)
	DvirGJ16653	HIT-type domain-containing protein. (335 aa)
	DvirGJ16679	Ribosomal_L7Ae domain-containing protein. (271 aa)
	DvirGJ16713	Uncharacterized protein. (123 aa)
	DvirGJ10510	Uncharacterized protein. (307 aa)
	DvirGJ10532	Uncharacterized protein. (353 aa)
	DvirGJ10591	CP-type G domain-containing protein. (581 aa)
	DvirGJ10181	SURF6 domain-containing protein. (330 aa)
	DvirGJ10992	FtsJ domain-containing protein. (254 aa)
	DvirGJ23050	RRM domain-containing protein. (366 aa)
	DvirGJ24129	Ribosomal_L6e_N domain-containing protein. (262 aa)
	DvirGJ23102	Uncharacterized protein. (209 aa)
	DvirGJ22542	Brix domain-containing protein. (314 aa)
	DvirGJ23143	Uncharacterized protein, isoform A; Belongs to the DEAD box helicase family. (670 aa)
	DvirGJ24565	Uncharacterized protein. (159 aa)
	DvirGJ23794	TRASH domain-containing protein. (191 aa)
	DvirGJ23500	Brix domain-containing protein. (415 aa)
	DvirGJ22951	HIT-type domain-containing protein. (410 aa)
	DvirGJ23588	60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (180 aa)
	DvirGJ17314	Uncharacterized protein. (257 aa)
	DvirGJ17811	Uncharacterized protein. (755 aa)
	DvirGJ17194	Ribosomal_L16 domain-containing protein. (219 aa)
	DvirGJ17795	Uncharacterized protein. (519 aa)
	DvirGJ19693	WD_REPEATS_REGION domain-containing protein. (488 aa)
	DvirGJ20668	Brix domain-containing protein. (395 aa)
	GJ17641	Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. (419 aa)
	GJ14807	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (633 aa)
	DvirGJ21086	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (652 aa)
	DvirGJ19965	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (259 aa)
	DvirGJ20080	CLP1_P domain-containing protein. (967 aa)
	GJ22246	Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (780 aa)
	DvirGJ20769	Yae1_N domain-containing protein. (138 aa)
	eIF6	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (245 aa)
	DvirGJ20890	Uncharacterized protein. (419 aa)
	DvirGJ12069	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (347 aa)
	DvirGJ13779	Uncharacterized protein. (354 aa)
	DvirGJ11595	Ribosomal_L7Ae domain-containing protein. (160 aa)
	DvirGJ11724	Uncharacterized protein, isoform A. (527 aa)
	DvirGJ13582	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (317 aa)
	DvirGJ11814	Uncharacterized protein. (217 aa)
	DvirGJ11849	KOW domain-containing protein. (149 aa)
	DvirGJ12535	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family. (276 aa)
	DvirGJ12847	Uncharacterized protein. (306 aa)
	DvirGJ12560	Brix domain-containing protein. (351 aa)
	DvirGJ13973	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family. (150 aa)
	DvirGJ15046	Ribosomal_L18_c domain-containing protein. (299 aa)
	DvirGJ21543	Uncharacterized protein, isoform B. (149 aa)
	DvirGJ15890	Uncharacterized protein. (403 aa)
	DvirGJ14390	Uncharacterized protein. (2083 aa)

Your Current Organism:

Drosophila virilis

NCBI taxonomy Id: 7244
Other names: D. virilis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DvirGJ10181	DvirGJ10510	B4M4S6	B4M5U9	SURF6 domain-containing protein.	Uncharacterized protein.	0.982
DvirGJ10181	DvirGJ10591	B4M4S6	B4M5J2	SURF6 domain-containing protein.	CP-type G domain-containing protein.	0.909
DvirGJ10181	DvirGJ10992	B4M4S6	B4M4R8	SURF6 domain-containing protein.	FtsJ domain-containing protein.	0.432
DvirGJ10181	DvirGJ11595	B4M4S6	B4LFM7	SURF6 domain-containing protein.	Ribosomal_L7Ae domain-containing protein.	0.821
DvirGJ10181	DvirGJ11849	B4M4S6	B4LD51	SURF6 domain-containing protein.	KOW domain-containing protein.	0.465
DvirGJ10181	DvirGJ12069	B4M4S6	B4LH49	SURF6 domain-containing protein.	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.	0.884
DvirGJ10181	DvirGJ12560	B4M4S6	B4LBQ6	SURF6 domain-containing protein.	Brix domain-containing protein.	0.967
DvirGJ10181	DvirGJ13582	B4M4S6	B4LE06	SURF6 domain-containing protein.	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	0.587
DvirGJ10181	DvirGJ14400	B4M4S6	B4MBB1	SURF6 domain-containing protein.	Nucleoplasmin domain-containing protein.	0.495
DvirGJ10181	DvirGJ15381	B4M4S6	B4MD84	SURF6 domain-containing protein.	Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family.	0.871
DvirGJ10181	DvirGJ15389	B4M4S6	B4MD95	SURF6 domain-containing protein.	Protein MAK16 homolog; Belongs to the MAK16 family.	0.967
DvirGJ10181	DvirGJ15847	B4M4S6	B4MA57	SURF6 domain-containing protein.	Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits.	0.886
DvirGJ10181	DvirGJ16679	B4M4S6	B4M825	SURF6 domain-containing protein.	Ribosomal_L7Ae domain-containing protein.	0.688
DvirGJ10181	DvirGJ16713	B4M4S6	B4M807	SURF6 domain-containing protein.	Uncharacterized protein.	0.465
DvirGJ10181	DvirGJ17314	B4M4S6	B4LUH6	SURF6 domain-containing protein.	Uncharacterized protein.	0.756
DvirGJ10181	DvirGJ17587	B4M4S6	B4ME33	SURF6 domain-containing protein.	Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family.	0.716
DvirGJ10181	DvirGJ17795	B4M4S6	B4LTQ1	SURF6 domain-containing protein.	Uncharacterized protein.	0.669
DvirGJ10181	DvirGJ17811	B4M4S6	B4LU00	SURF6 domain-containing protein.	Uncharacterized protein.	0.884
DvirGJ10181	DvirGJ17944	B4M4S6	B4M9C2	SURF6 domain-containing protein.	Uncharacterized protein.	0.779
DvirGJ10181	DvirGJ18081	B4M4S6	B4MDU5	SURF6 domain-containing protein.	SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	0.712