12 items (Drosophila virilis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DvirGJ20467	Skp1_POZ domain-containing protein; Belongs to the SKP1 family. (117 aa)
	DvirGJ15620	Uncharacterized protein. (727 aa)
	DvirGJ24297	Ubiquitin-like domain-containing protein. (118 aa)
	DvirGJ14230	CULLIN_2 domain-containing protein; Belongs to the cullin family. (756 aa)
	DvirGJ10286	Uncharacterized protein, isoform A. (643 aa)
	DvirGJ21870	Uncharacterized protein. (561 aa)
	DvirGJ14980	Uncharacterized protein. (695 aa)
	DvirGJ16047	Uncharacterized protein. (2721 aa)
	DvirGJ14961	Uncharacterized protein, isoform C. (593 aa)
	DvirGJ12338	Uncharacterized protein, isoform A. (553 aa)
	DvirGJ13882	Uncharacterized protein. (985 aa)
	DvirGJ22133	Uncharacterized protein. (382 aa)

Your Current Organism:

Drosophila virilis

NCBI taxonomy Id: 7244
Other names: D. virilis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DvirGJ10286	DvirGJ12338	B4LTR9	B4LE80	Uncharacterized protein, isoform A.	Uncharacterized protein, isoform A.	0.418
DvirGJ10286	DvirGJ14230	B4LTR9	B4LUQ0	Uncharacterized protein, isoform A.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.639
DvirGJ10286	DvirGJ14961	B4LTR9	A0A0Q9VYA0	Uncharacterized protein, isoform A.	Uncharacterized protein, isoform C.	0.451
DvirGJ10286	DvirGJ20467	B4LTR9	B4LNW7	Uncharacterized protein, isoform A.	Skp1_POZ domain-containing protein; Belongs to the SKP1 family.	0.959
DvirGJ10286	DvirGJ24297	B4LTR9	B4LWN4	Uncharacterized protein, isoform A.	Ubiquitin-like domain-containing protein.	0.938
DvirGJ12338	DvirGJ10286	B4LE80	B4LTR9	Uncharacterized protein, isoform A.	Uncharacterized protein, isoform A.	0.418
DvirGJ14230	DvirGJ10286	B4LUQ0	B4LTR9	CULLIN_2 domain-containing protein; Belongs to the cullin family.	Uncharacterized protein, isoform A.	0.639
DvirGJ14230	DvirGJ20467	B4LUQ0	B4LNW7	CULLIN_2 domain-containing protein; Belongs to the cullin family.	Skp1_POZ domain-containing protein; Belongs to the SKP1 family.	0.999
DvirGJ14230	DvirGJ22133	B4LUQ0	B4LJM5	CULLIN_2 domain-containing protein; Belongs to the cullin family.	Uncharacterized protein.	0.709
DvirGJ14230	DvirGJ24297	B4LUQ0	B4LWN4	CULLIN_2 domain-containing protein; Belongs to the cullin family.	Ubiquitin-like domain-containing protein.	0.998
DvirGJ14961	DvirGJ10286	A0A0Q9VYA0	B4LTR9	Uncharacterized protein, isoform C.	Uncharacterized protein, isoform A.	0.451
DvirGJ20467	DvirGJ10286	B4LNW7	B4LTR9	Skp1_POZ domain-containing protein; Belongs to the SKP1 family.	Uncharacterized protein, isoform A.	0.959
DvirGJ20467	DvirGJ14230	B4LNW7	B4LUQ0	Skp1_POZ domain-containing protein; Belongs to the SKP1 family.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.999
DvirGJ20467	DvirGJ22133	B4LNW7	B4LJM5	Skp1_POZ domain-containing protein; Belongs to the SKP1 family.	Uncharacterized protein.	0.916
DvirGJ20467	DvirGJ24297	B4LNW7	B4LWN4	Skp1_POZ domain-containing protein; Belongs to the SKP1 family.	Ubiquitin-like domain-containing protein.	0.999
DvirGJ22133	DvirGJ14230	B4LJM5	B4LUQ0	Uncharacterized protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.709
DvirGJ22133	DvirGJ20467	B4LJM5	B4LNW7	Uncharacterized protein.	Skp1_POZ domain-containing protein; Belongs to the SKP1 family.	0.916
DvirGJ22133	DvirGJ24297	B4LJM5	B4LWN4	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.920
DvirGJ24297	DvirGJ10286	B4LWN4	B4LTR9	Ubiquitin-like domain-containing protein.	Uncharacterized protein, isoform A.	0.938
DvirGJ24297	DvirGJ14230	B4LWN4	B4LUQ0	Ubiquitin-like domain-containing protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.998