6 items (Drosophila virilis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DvirGJ15055	Uncharacterized protein, isoform I. (2238 aa)
	DvirGJ16871	Uncharacterized protein, isoform B. (3026 aa)
	DvirGJ22879	Uncharacterized protein, isoform C. (1741 aa)
	DvirGJ13392	Uncharacterized protein, isoform A. (1349 aa)
	DvirGJ17691	Uncharacterized protein. (608 aa)
	DvirGJ23976	Uncharacterized protein, isoform E. (2785 aa)

Your Current Organism:

Drosophila virilis

NCBI taxonomy Id: 7244
Other names: D. virilis

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DvirGJ13392	DvirGJ15055	B4LBB1	A0A0Q9VYN2	Uncharacterized protein, isoform A.	Uncharacterized protein, isoform I.	0.912
DvirGJ13392	DvirGJ22879	B4LBB1	A0A0Q9WNM5	Uncharacterized protein, isoform A.	Uncharacterized protein, isoform C.	0.983
DvirGJ15055	DvirGJ13392	A0A0Q9VYN2	B4LBB1	Uncharacterized protein, isoform I.	Uncharacterized protein, isoform A.	0.912
DvirGJ15055	DvirGJ22879	A0A0Q9VYN2	A0A0Q9WNM5	Uncharacterized protein, isoform I.	Uncharacterized protein, isoform C.	0.618
DvirGJ15055	DvirGJ23976	A0A0Q9VYN2	B4LZH2	Uncharacterized protein, isoform I.	Uncharacterized protein, isoform E.	0.948
DvirGJ22879	DvirGJ13392	A0A0Q9WNM5	B4LBB1	Uncharacterized protein, isoform C.	Uncharacterized protein, isoform A.	0.983
DvirGJ22879	DvirGJ15055	A0A0Q9WNM5	A0A0Q9VYN2	Uncharacterized protein, isoform C.	Uncharacterized protein, isoform I.	0.618
DvirGJ22879	DvirGJ23976	A0A0Q9WNM5	B4LZH2	Uncharacterized protein, isoform C.	Uncharacterized protein, isoform E.	0.996
DvirGJ23976	DvirGJ15055	B4LZH2	A0A0Q9VYN2	Uncharacterized protein, isoform E.	Uncharacterized protein, isoform I.	0.948
DvirGJ23976	DvirGJ22879	B4LZH2	A0A0Q9WNM5	Uncharacterized protein, isoform E.	Uncharacterized protein, isoform C.	0.996