5 items (Drosophila virilis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DVIR88_6g0043	Uncharacterized protein. (3494 aa)
	DvirGJ23976	Uncharacterized protein, isoform E. (2785 aa)
	DvirGJ18433	Uncharacterized protein, isoform F. (3497 aa)
	DvirGJ13392	Uncharacterized protein, isoform A. (1349 aa)
	DvirGJ17415	Uncharacterized protein, isoform A. (467 aa)

Your Current Organism:

Drosophila virilis

NCBI taxonomy Id: 7244
Other names: D. virilis

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DVIR88_6g0043	DvirGJ13392	D0Z7E8	B4LBB1	Uncharacterized protein.	Uncharacterized protein, isoform A.	0.988
DVIR88_6g0043	DvirGJ17415	D0Z7E8	B4LV77	Uncharacterized protein.	Uncharacterized protein, isoform A.	0.763
DVIR88_6g0043	DvirGJ23976	D0Z7E8	B4LZH2	Uncharacterized protein.	Uncharacterized protein, isoform E.	0.999
DvirGJ13392	DVIR88_6g0043	B4LBB1	D0Z7E8	Uncharacterized protein, isoform A.	Uncharacterized protein.	0.988
DvirGJ13392	DvirGJ17415	B4LBB1	B4LV77	Uncharacterized protein, isoform A.	Uncharacterized protein, isoform A.	0.412
DvirGJ13392	DvirGJ18433	B4LBB1	A0A0Q9WL55	Uncharacterized protein, isoform A.	Uncharacterized protein, isoform F.	0.988
DvirGJ17415	DVIR88_6g0043	B4LV77	D0Z7E8	Uncharacterized protein, isoform A.	Uncharacterized protein.	0.763
DvirGJ17415	DvirGJ13392	B4LV77	B4LBB1	Uncharacterized protein, isoform A.	Uncharacterized protein, isoform A.	0.412
DvirGJ17415	DvirGJ18433	B4LV77	A0A0Q9WL55	Uncharacterized protein, isoform A.	Uncharacterized protein, isoform F.	0.763
DvirGJ17415	DvirGJ23976	B4LV77	B4LZH2	Uncharacterized protein, isoform A.	Uncharacterized protein, isoform E.	0.741
DvirGJ18433	DvirGJ13392	A0A0Q9WL55	B4LBB1	Uncharacterized protein, isoform F.	Uncharacterized protein, isoform A.	0.988
DvirGJ18433	DvirGJ17415	A0A0Q9WL55	B4LV77	Uncharacterized protein, isoform F.	Uncharacterized protein, isoform A.	0.763
DvirGJ18433	DvirGJ23976	A0A0Q9WL55	B4LZH2	Uncharacterized protein, isoform F.	Uncharacterized protein, isoform E.	0.999
DvirGJ23976	DVIR88_6g0043	B4LZH2	D0Z7E8	Uncharacterized protein, isoform E.	Uncharacterized protein.	0.999
DvirGJ23976	DvirGJ17415	B4LZH2	B4LV77	Uncharacterized protein, isoform E.	Uncharacterized protein, isoform A.	0.741
DvirGJ23976	DvirGJ18433	B4LZH2	A0A0Q9WL55	Uncharacterized protein, isoform E.	Uncharacterized protein, isoform F.	0.999