31 items (Drosophila virilis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DvirGJ22286	Uncharacterized protein, isoform C. (210 aa)
	DvirGJ16405	Uncharacterized protein, isoform B. (737 aa)
	DvirGJ25927	Raptor_N domain-containing protein. (1561 aa)
	DvirGJ13348	Uncharacterized protein, isoform F. (3567 aa)
	DvirGJ12454	Uncharacterized protein. (339 aa)
	DvirGJ13100	Uncharacterized protein; Belongs to the cyclin family. (1142 aa)
	DvirGJ13209	Uncharacterized protein. (192 aa)
	DvirGJ13293	Uncharacterized protein. (1095 aa)
	DvirGJ20128	CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (320 aa)
	DvirGJ20064	Uncharacterized protein. (198 aa)
	DvirGJ22375	ARTD15_N domain-containing protein. (366 aa)
	DvirGJ19914	Ubiquitin-like domain-containing protein. (102 aa)
	DvirGJ21068	INCENP_ARK-bind domain-containing protein. (780 aa)
	DvirGJ22443	Protein kinase domain-containing protein. (1086 aa)
	DvirGJ22011	Uncharacterized protein. (608 aa)
	DvirGJ17477	CYCLIN domain-containing protein; Belongs to the cyclin family. (393 aa)
	DvirGJ15154	Uncharacterized protein; Belongs to the cyclin family. (425 aa)
	DvirGJ21441	Small ubiquitin-related modifier. (90 aa)
	DvirGJ17204	Uncharacterized protein, isoform B. (273 aa)
	DvirGJ17456	DBF4-type domain-containing protein. (1836 aa)
	DvirGJ24290	Uncharacterized protein, isoform A; Belongs to the PI3/PI4-kinase family. (1076 aa)
	DvirGJ22877	Uncharacterized protein. (210 aa)
	DvirGJ24587	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (93 aa)
	DvirGJ18731	Uncharacterized protein. (1969 aa)
	DvirGJ19009	Uncharacterized protein. (301 aa)
	Pgam5	Serine/threonine-protein phosphatase Pgam5, mitochondrial; Displays phosphatase activity for serine/threonine residues, and dephosphorylates and activates Pk92B kinase. Has apparently no phosphoglycerate mutase activity (By similarity). (289 aa)
	DvirGJ17855	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (75 aa)
	DvirGJ16144	Uncharacterized protein, isoform C. (979 aa)
	DvirGJ15405	Cyclin-dependent kinase 5 activator. (446 aa)
	DvirGJ18559	Small ubiquitin-related modifier. (101 aa)
	DvirGJ18569	PH domain-containing protein. (130 aa)

Your Current Organism:

Drosophila virilis

NCBI taxonomy Id: 7244
Other names: D. virilis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DvirGJ12454	DvirGJ13348	B4LCY7	A0A0Q9WSD1	Uncharacterized protein.	Uncharacterized protein, isoform F.	0.401
DvirGJ13100	DvirGJ15154	B4LEZ8	B4LQT2	Uncharacterized protein; Belongs to the cyclin family.	Uncharacterized protein; Belongs to the cyclin family.	0.769
DvirGJ13100	DvirGJ20128	B4LEZ8	B4LKP0	Uncharacterized protein; Belongs to the cyclin family.	CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex.	0.760
DvirGJ13209	DvirGJ20064	B4LG76	B4LLE0	Uncharacterized protein.	Uncharacterized protein.	0.615
DvirGJ13209	DvirGJ22286	B4LG76	A0A0Q9WFZ7	Uncharacterized protein.	Uncharacterized protein, isoform C.	0.716
DvirGJ13209	DvirGJ24290	B4LG76	B4LWM3	Uncharacterized protein.	Uncharacterized protein, isoform A; Belongs to the PI3/PI4-kinase family.	0.522
DvirGJ13348	DvirGJ12454	A0A0Q9WSD1	B4LCY7	Uncharacterized protein, isoform F.	Uncharacterized protein.	0.401
DvirGJ15154	DvirGJ13100	B4LQT2	B4LEZ8	Uncharacterized protein; Belongs to the cyclin family.	Uncharacterized protein; Belongs to the cyclin family.	0.769
DvirGJ15154	DvirGJ20128	B4LQT2	B4LKP0	Uncharacterized protein; Belongs to the cyclin family.	CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex.	0.743
DvirGJ18559	DvirGJ19914	B4MGB5	B4LN27	Small ubiquitin-related modifier.	Ubiquitin-like domain-containing protein.	0.904
DvirGJ18559	DvirGJ21068	B4MGB5	B4LN73	Small ubiquitin-related modifier.	INCENP_ARK-bind domain-containing protein.	0.413
DvirGJ18559	DvirGJ21441	B4MGB5	B4LRF4	Small ubiquitin-related modifier.	Small ubiquitin-related modifier.	0.901
DvirGJ18731	DvirGJ22011	B4M236	B4LQA4	Uncharacterized protein.	Uncharacterized protein.	0.999
DvirGJ18731	DvirGJ24290	B4M236	B4LWM3	Uncharacterized protein.	Uncharacterized protein, isoform A; Belongs to the PI3/PI4-kinase family.	0.464
DvirGJ18731	DvirGJ25927	B4M236	A0A0Q9WI10	Uncharacterized protein.	Raptor_N domain-containing protein.	0.846
DvirGJ19914	DvirGJ18559	B4LN27	B4MGB5	Ubiquitin-like domain-containing protein.	Small ubiquitin-related modifier.	0.904
DvirGJ19914	DvirGJ21068	B4LN27	B4LN73	Ubiquitin-like domain-containing protein.	INCENP_ARK-bind domain-containing protein.	0.413
DvirGJ19914	DvirGJ21441	B4LN27	B4LRF4	Ubiquitin-like domain-containing protein.	Small ubiquitin-related modifier.	0.903
DvirGJ20064	DvirGJ13209	B4LLE0	B4LG76	Uncharacterized protein.	Uncharacterized protein.	0.615
DvirGJ20064	DvirGJ22286	B4LLE0	A0A0Q9WFZ7	Uncharacterized protein.	Uncharacterized protein, isoform C.	0.901