89 items (Drosophila virilis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DvirGJ26815	Neur_chan_LBD domain-containing protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (221 aa)
	DvirGJ22950	Uncharacterized protein, isoform H. (770 aa)
	DvirGJ22953	Uncharacterized protein, isoform C. (542 aa)
	DvirGJ23648	Uncharacterized protein, isoform D. (1240 aa)
	DvirGJ14381	Uncharacterized protein, isoform F. (946 aa)
	DvirGJ18873	Uncharacterized protein, isoform B. (1182 aa)
	DvirGJ25695	Uncharacterized protein, isoform A. (101 aa)
	DvirGJ26971	Uncharacterized protein. (234 aa)
	DvirGJ20041	Uncharacterized protein, isoform B. (1337 aa)
	DvirGJ18541	Uncharacterized protein, isoform C. (1317 aa)
	DvirGJ15244	Uncharacterized protein, isoform AA; Belongs to the MAGUK family. (1334 aa)
	DvirGJ10104	Uncharacterized protein, isoform B. (1518 aa)
	DvirGJ10698	Uncharacterized protein, isoform B; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (959 aa)
	DvirGJ14169	Uncharacterized protein. (2693 aa)
	DvirGJ22507	Uncharacterized protein, isoform B; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (373 aa)
	vlc	Vlc, isoform C. (654 aa)
	DvirGJ19023	Uncharacterized protein. (781 aa)
	DvirGJ17530	Uncharacterized protein, isoform B. (897 aa)
	DVIR88_6g0043	Uncharacterized protein. (3494 aa)
	DvirGJ20463	Uncharacterized protein, isoform B. (531 aa)
	DVIR88_6g0003	Uncharacterized protein. (914 aa)
	DvirGJ16049	Uncharacterized protein, isoform E. (2100 aa)
	DvirGJ18564	Uncharacterized protein. (590 aa)
	DvirGJ15551	Uncharacterized protein. (992 aa)
	DvirGJ12536	Uncharacterized protein, isoform A. (1103 aa)
	DvirGJ14758	Uncharacterized protein. (1023 aa)
	DvirGJ15394	Diacylglycerol kinase. (1481 aa)
	DvirGJ11181	Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family. (195 aa)
	DvirGJ15849	Uncharacterized protein. (1167 aa)
	DvirGJ15823	Uncharacterized protein. (356 aa)
	DvirGJ17870	Uncharacterized protein. (234 aa)
	DvirGJ17871	Uncharacterized protein, isoform C. (235 aa)
	DvirGJ18363	Uncharacterized protein. (231 aa)
	DvirGJ18171	Uncharacterized protein. (692 aa)
	DvirGJ16423	Uncharacterized protein, isoform D. (875 aa)
	DvirGJ17000	Integrin beta; Belongs to the integrin beta chain family. (911 aa)
	DvirGJ17531	Uncharacterized protein; Belongs to the DEAD box helicase family. (459 aa)
	DvirGJ12409	Uncharacterized protein, isoform C. (1009 aa)
	DvirGJ12400	Uncharacterized protein. (239 aa)
	DvirGJ15538	Uncharacterized protein. (908 aa)
	DvirGJ15540	Uncharacterized protein. (914 aa)
	DvirGJ21312	COesterase domain-containing protein. (1217 aa)
	DvirGJ20377	Uncharacterized protein. (84 aa)
	DvirGJ17782	Uncharacterized protein. (445 aa)
	DvirGJ17806	Uncharacterized protein, isoform A. (947 aa)
	DvirGJ24171	Uncharacterized protein. (235 aa)
	nos	Nanos, isoform A; Belongs to the nanos family. (380 aa)
	DvirGJ24267	Uncharacterized protein. (858 aa)
	DvirGJ24288	Uncharacterized protein. (900 aa)
	DvirGJ24289	Uncharacterized protein. (901 aa)
	DvirGJ23445	Uncharacterized protein. (1243 aa)
	DvirGJ23404	Uncharacterized protein. (599 aa)
	DvirGJ23817	Uncharacterized protein. (573 aa)
	DvirGJ23403	Uncharacterized protein. (519 aa)
	boss	Bride of sevenless, isoform A. (893 aa)
	DvirGJ23974	Fibroblast growth factor receptor. (737 aa)
	Nmdar1	Glutamate [NMDA] receptor subunit 1; NMDA receptor subtype of glutamate-gated ion channels with high calcium permeability and voltage-dependent sensitivity to magnesium. Mediated by glycine. This protein plays a key role in synaptic plasticity, synaptogenesis, excitotoxicity, memory acquisition and learning. It mediates neuronal functions in glutamate neurotransmission. Is involved in the cell surface targeting of NMDA receptors. Plays a role in associative learning and in long-term memory consolidation (By similarity). (984 aa)
	DvirGJ24601	Non-specific serine/threonine protein kinase. (705 aa)
	DvirGJ18807	Uncharacterized protein. (1989 aa)
	DvirGJ10932	Uncharacterized protein, isoform A. (471 aa)
	DvirGJ10226	COesterase domain-containing protein. (1163 aa)
	DvirGJ10948	Uncharacterized protein, isoform B; Belongs to the type-B carboxylesterase/lipase family. (1451 aa)
	DvirGJ10720	Uncharacterized protein. (663 aa)
	DvirGJ16445	Molybdopterin molybdenumtransferase; Catalyzes two steps in the biosynthesis of the molybdenum cofactor. In the first step, molybdopterin is adenylated. Subsequently, molybdate is inserted into adenylated molybdopterin and AMP is released. (609 aa)
	DvirGJ14694	Uncharacterized protein, isoform D. (507 aa)
	DvirGJ21894	COesterase domain-containing protein. (562 aa)
	DvirGJ21322	Uncharacterized protein. (1848 aa)
	DvirGJ21264	CIDE-N domain-containing protein. (497 aa)
	DvirGJ21815	Aldolase_II domain-containing protein. (2300 aa)
	DvirGJ21795	Uncharacterized protein. (1175 aa)
	DvirGJ22175	Uncharacterized protein. (213 aa)
	DvirGJ12625	Uncharacterized protein, isoform A. (207 aa)
	DvirGJ12732	PDZ domain-containing protein. (813 aa)
	DvirGJ12715	Uncharacterized protein. (521 aa)
	DvirGJ13222	Uncharacterized protein. (553 aa)
	DvirGJ13754	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family. (223 aa)
	DvirGJ12248	Uncharacterized protein, isoform A. (572 aa)
	DvirGJ13091	Uncharacterized protein. (930 aa)
	DvirGJ11749	AH domain-containing protein. (414 aa)
	DvirGJ11261	Biogenesis of lysosome-related organelles complex 1 subunit 6; Component of the biogenesis of lysosome-related organelles complex-1 (BLOC-1) involved in pigment granule biogenesis. (161 aa)
	DvirGJ12529	Uncharacterized protein, isoform A. (1051 aa)
	wls	Protein wntless; A segment polarity gene required for wingless (wg)-dependent patterning processes, acting in both wg-sending cells and wg-target cells. In non-neuronal cells wls directs wg secretion. The wls traffic loop encompasses the Golgi, the cell surface, an endocytic compartment and a retrograde route leading back to the Golgi, and involves clathrin-mediated endocytosis and the retromer complex (a conserved protein complex consisting of Vps35 and Vps26). In neuronal cells (the larval motorneuron NMJ), the wg signal moves across the synapse via the release of wls-containing exos [...] (562 aa)
	DvirGJ11623	Uncharacterized protein, isoform B. (526 aa)
	DvirGJ13712	Uncharacterized protein, isoform C. (2906 aa)
	DvirGJ18639	Uncharacterized protein, isoform E. (784 aa)
	DvirGJ17344	Uncharacterized protein, isoform K. (606 aa)
	DvirGJ16275	Uncharacterized protein, isoform C. (566 aa)
	DvirGJ18433	Uncharacterized protein, isoform F. (3497 aa)
	DvirGJ13012	Uncharacterized protein, isoform G. (809 aa)

Your Current Organism:

Drosophila virilis

NCBI taxonomy Id: 7244
Other names: D. virilis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DVIR88_6g0043	DvirGJ10932	D0Z7E8	B4M4G2	Uncharacterized protein.	Uncharacterized protein, isoform A.	0.511
DVIR88_6g0043	DvirGJ18807	D0Z7E8	B4M1Q0	Uncharacterized protein.	Uncharacterized protein.	0.437
DVIR88_6g0043	DvirGJ18873	D0Z7E8	A0A0Q9WC54	Uncharacterized protein.	Uncharacterized protein, isoform B.	0.437
DVIR88_6g0043	DvirGJ20463	D0Z7E8	D0Z795	Uncharacterized protein.	Uncharacterized protein, isoform B.	0.508
DvirGJ10104	DvirGJ17531	A0A0Q9W1U3	B4LR21	Uncharacterized protein, isoform B.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.725
DvirGJ10104	nos	A0A0Q9W1U3	B4LWF8	Uncharacterized protein, isoform B.	Nanos, isoform A; Belongs to the nanos family.	0.973
DvirGJ10720	DvirGJ17531	B4M676	B4LR21	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.549
DvirGJ10932	DVIR88_6g0043	B4M4G2	D0Z7E8	Uncharacterized protein, isoform A.	Uncharacterized protein.	0.511
DvirGJ10932	DvirGJ13754	B4M4G2	B4LG05	Uncharacterized protein, isoform A.	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	0.654
DvirGJ10932	DvirGJ16445	B4M4G2	B4M7I3	Uncharacterized protein, isoform A.	Molybdopterin molybdenumtransferase; Catalyzes two steps in the biosynthesis of the molybdenum cofactor. In the first step, molybdopterin is adenylated. Subsequently, molybdate is inserted into adenylated molybdopterin and AMP is released.	0.406
DvirGJ10932	DvirGJ18433	B4M4G2	A0A0Q9WL55	Uncharacterized protein, isoform A.	Uncharacterized protein, isoform F.	0.511
DvirGJ11749	DvirGJ16275	B4LEC2	A0A0Q9WLI2	AH domain-containing protein.	Uncharacterized protein, isoform C.	0.694
DvirGJ11749	DvirGJ22175	B4LEC2	B4LK10	AH domain-containing protein.	Uncharacterized protein.	0.644
DvirGJ12529	DvirGJ17000	B4LC88	B4M7J6	Uncharacterized protein, isoform A.	Integrin beta; Belongs to the integrin beta chain family.	0.668
DvirGJ12715	DvirGJ18171	B4LGV9	B4M8Q7	Uncharacterized protein.	Uncharacterized protein.	0.473
DvirGJ12715	DvirGJ18564	B4LGV9	B4MGC3	Uncharacterized protein.	Uncharacterized protein.	0.474
DvirGJ12732	DvirGJ15244	B4LHD8	A0A0Q9W898	PDZ domain-containing protein.	Uncharacterized protein, isoform AA; Belongs to the MAGUK family.	0.407
DvirGJ12732	DvirGJ15823	B4LHD8	B4MA03	PDZ domain-containing protein.	Uncharacterized protein.	0.506
DvirGJ13012	DvirGJ13754	A0A0Q9WI38	B4LG05	Uncharacterized protein, isoform G.	Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.	0.934
DvirGJ13712	DvirGJ17000	A0A0Q9WWU6	B4M7J6	Uncharacterized protein, isoform C.	Integrin beta; Belongs to the integrin beta chain family.	0.681