16 items (Drosophila virilis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DvirGJ16871	Uncharacterized protein, isoform B. (3026 aa)
	DvirGJ15055	Uncharacterized protein, isoform I. (2238 aa)
	DvirGJ26854	Uncharacterized protein, isoform A. (1245 aa)
	DvirGJ15641	Spectrin beta chain; Belongs to the spectrin family. (2308 aa)
	DvirGJ22727	Uncharacterized protein, isoform P. (3636 aa)
	DvirGJ11629	Uncharacterized protein, isoform F. (1059 aa)
	DvirGJ22879	Uncharacterized protein, isoform C. (1741 aa)
	DvirGJ24460	Uncharacterized protein, isoform C. (1864 aa)
	DvirGJ13712	Uncharacterized protein, isoform C. (2906 aa)
	DvirGJ13392	Uncharacterized protein, isoform A. (1349 aa)
	DvirGJ12849	Sorting nexin; Belongs to the sorting nexin family. (563 aa)
	DvirGJ12463	Uncharacterized protein. (1207 aa)
	DvirGJ21312	COesterase domain-containing protein. (1217 aa)
	DvirGJ18973	Uncharacterized protein. (2079 aa)
	DvirGJ15037	Uncharacterized protein, isoform D. (792 aa)
	DvirGJ16071	Uncharacterized protein, isoform A. (2441 aa)

Your Current Organism:

Drosophila virilis

NCBI taxonomy Id: 7244
Other names: D. virilis

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DvirGJ12463	DvirGJ13392	B4LR86	B4LBB1	Uncharacterized protein.	Uncharacterized protein, isoform A.	0.965
DvirGJ12463	DvirGJ15055	B4LR86	A0A0Q9VYN2	Uncharacterized protein.	Uncharacterized protein, isoform I.	0.835
DvirGJ12463	DvirGJ22879	B4LR86	A0A0Q9WNM5	Uncharacterized protein.	Uncharacterized protein, isoform C.	0.894
DvirGJ12463	DvirGJ24460	B4LR86	A0A0Q9WTW9	Uncharacterized protein.	Uncharacterized protein, isoform C.	0.452
DvirGJ12849	DvirGJ26854	B4LBR4	A0A0Q9W3U2	Sorting nexin; Belongs to the sorting nexin family.	Uncharacterized protein, isoform A.	0.515
DvirGJ13392	DvirGJ12463	B4LBB1	B4LR86	Uncharacterized protein, isoform A.	Uncharacterized protein.	0.965
DvirGJ13392	DvirGJ15055	B4LBB1	A0A0Q9VYN2	Uncharacterized protein, isoform A.	Uncharacterized protein, isoform I.	0.912
DvirGJ13392	DvirGJ22879	B4LBB1	A0A0Q9WNM5	Uncharacterized protein, isoform A.	Uncharacterized protein, isoform C.	0.983
DvirGJ13712	DvirGJ16871	A0A0Q9WWU6	A0A0Q9W725	Uncharacterized protein, isoform C.	Uncharacterized protein, isoform B.	0.415
DvirGJ15037	DvirGJ22727	B4MFG9	A0A0Q9WIB5	Uncharacterized protein, isoform D.	Uncharacterized protein, isoform P.	0.833
DvirGJ15055	DvirGJ12463	A0A0Q9VYN2	B4LR86	Uncharacterized protein, isoform I.	Uncharacterized protein.	0.835
DvirGJ15055	DvirGJ13392	A0A0Q9VYN2	B4LBB1	Uncharacterized protein, isoform I.	Uncharacterized protein, isoform A.	0.912
DvirGJ15055	DvirGJ22879	A0A0Q9VYN2	A0A0Q9WNM5	Uncharacterized protein, isoform I.	Uncharacterized protein, isoform C.	0.618
DvirGJ15055	DvirGJ24460	A0A0Q9VYN2	A0A0Q9WTW9	Uncharacterized protein, isoform I.	Uncharacterized protein, isoform C.	0.511
DvirGJ15641	DvirGJ16071	A0A0Q9WDA0	B4MGM3	Spectrin beta chain; Belongs to the spectrin family.	Uncharacterized protein, isoform A.	0.958
DvirGJ16071	DvirGJ15641	B4MGM3	A0A0Q9WDA0	Uncharacterized protein, isoform A.	Spectrin beta chain; Belongs to the spectrin family.	0.958
DvirGJ16871	DvirGJ13712	A0A0Q9W725	A0A0Q9WWU6	Uncharacterized protein, isoform B.	Uncharacterized protein, isoform C.	0.415
DvirGJ22727	DvirGJ15037	A0A0Q9WIB5	B4MFG9	Uncharacterized protein, isoform P.	Uncharacterized protein, isoform D.	0.833
DvirGJ22879	DvirGJ12463	A0A0Q9WNM5	B4LR86	Uncharacterized protein, isoform C.	Uncharacterized protein.	0.894
DvirGJ22879	DvirGJ13392	A0A0Q9WNM5	B4LBB1	Uncharacterized protein, isoform C.	Uncharacterized protein, isoform A.	0.983