4 items (Drosophila virilis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DvirGJ15203	Uncharacterized protein; Belongs to the synaptobrevin family. (171 aa)
	DvirGJ20482	Uncharacterized protein, isoform A; Belongs to the synaptobrevin family. (219 aa)
	DvirGJ20156	Uncharacterized protein, isoform A. (152 aa)
	DvirGJ12544	Uncharacterized protein, isoform E. (203 aa)

Your Current Organism:

Drosophila virilis

NCBI taxonomy Id: 7244
Other names: D. virilis

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DvirGJ12544	DvirGJ15203	A0A0Q9WH82	B4MD50	Uncharacterized protein, isoform E.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.467
DvirGJ12544	DvirGJ20156	A0A0Q9WH82	B4LKC4	Uncharacterized protein, isoform E.	Uncharacterized protein, isoform A.	0.432
DvirGJ12544	DvirGJ20482	A0A0Q9WH82	B4LNG1	Uncharacterized protein, isoform E.	Uncharacterized protein, isoform A; Belongs to the synaptobrevin family.	0.717
DvirGJ15203	DvirGJ12544	B4MD50	A0A0Q9WH82	Uncharacterized protein; Belongs to the synaptobrevin family.	Uncharacterized protein, isoform E.	0.467
DvirGJ15203	DvirGJ20156	B4MD50	B4LKC4	Uncharacterized protein; Belongs to the synaptobrevin family.	Uncharacterized protein, isoform A.	0.467
DvirGJ15203	DvirGJ20482	B4MD50	B4LNG1	Uncharacterized protein; Belongs to the synaptobrevin family.	Uncharacterized protein, isoform A; Belongs to the synaptobrevin family.	0.483
DvirGJ20156	DvirGJ12544	B4LKC4	A0A0Q9WH82	Uncharacterized protein, isoform A.	Uncharacterized protein, isoform E.	0.432
DvirGJ20156	DvirGJ15203	B4LKC4	B4MD50	Uncharacterized protein, isoform A.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.467
DvirGJ20156	DvirGJ20482	B4LKC4	B4LNG1	Uncharacterized protein, isoform A.	Uncharacterized protein, isoform A; Belongs to the synaptobrevin family.	0.575
DvirGJ20482	DvirGJ12544	B4LNG1	A0A0Q9WH82	Uncharacterized protein, isoform A; Belongs to the synaptobrevin family.	Uncharacterized protein, isoform E.	0.717
DvirGJ20482	DvirGJ15203	B4LNG1	B4MD50	Uncharacterized protein, isoform A; Belongs to the synaptobrevin family.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.483
DvirGJ20482	DvirGJ20156	B4LNG1	B4LKC4	Uncharacterized protein, isoform A; Belongs to the synaptobrevin family.	Uncharacterized protein, isoform A.	0.575