(77 nodes) Helicase, C-terminal network (Drosophila virilis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DvirGJ19298	RNA helicase. (914 aa)
	DvirGJ25651	Uncharacterized protein. (619 aa)
	DvirGJ18281	Uncharacterized protein, isoform B. (1941 aa)
	DvirGJ22014	Uncharacterized protein, isoform B. (1867 aa)
	DvirGJ10732	Uncharacterized protein, isoform B. (779 aa)
	DvirGJ26615	Uncharacterized protein. (1556 aa)
	DvirGJ16136	Uncharacterized protein, isoform B; Belongs to the DEAD box helicase family. (537 aa)
	DvirGJ13998	Uncharacterized protein. (2012 aa)
	DvirGJ11781	Uncharacterized protein. (2142 aa)
	DvirGJ11780	Uncharacterized protein. (1674 aa)
	Dbp80	Dead box protein 80. (465 aa)
	Ddx1	Dead-box-1. (728 aa)
	DvirGJ11703	Uncharacterized protein. (1068 aa)
	DvirGJ13670	Uncharacterized protein. (809 aa)
	DvirGJ12262	Uncharacterized protein; Belongs to the DEAD box helicase family. (778 aa)
	DvirGJ11681	Uncharacterized protein. (1026 aa)
	DvirGJ13152	Uncharacterized protein. (1061 aa)
	DvirGJ12159	Uncharacterized protein; Belongs to the DEAD box helicase family. (680 aa)
	DvirGJ13322	Uncharacterized protein; Belongs to the DEAD box helicase family. (797 aa)
	DvirGJ13361	Uncharacterized protein. (1283 aa)
	DvirGJ13954	Uncharacterized protein, isoform A; Belongs to the DEAD box helicase family. (605 aa)
	DvirGJ20897	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1722 aa)
	DvirGJ21693	Uncharacterized protein; Belongs to the DEAD box helicase family. (784 aa)
	DvirGJ20044	Uncharacterized protein. (3172 aa)
	DvirGJ21163	Uncharacterized protein; Belongs to the DEAD box helicase family. (519 aa)
	DvirGJ21780	Uncharacterized protein. (732 aa)
	DvirGJ21808	Uncharacterized protein. (819 aa)
	DvirGJ21042	Uncharacterized protein. (1267 aa)
	DvirGJ21324	Uncharacterized protein, isoform A. (1366 aa)
	DvirGJ21345	Uncharacterized protein. (708 aa)
	DvirGJ21347	Uncharacterized protein. (1021 aa)
	DvirGJ20429	Uncharacterized protein. (1514 aa)
	DvirGJ22099	Uncharacterized protein. (931 aa)
	DvirGJ17531	Uncharacterized protein; Belongs to the DEAD box helicase family. (459 aa)
	DvirGJ15436	Uncharacterized protein, isoform A; Belongs to the DEAD box helicase family. (403 aa)
	DvirGJ21604	Uncharacterized protein. (842 aa)
	DvirGJ17767	Uncharacterized protein. (835 aa)
	DvirGJ17795	Uncharacterized protein. (519 aa)
	DvirGJ17817	Uncharacterized protein. (424 aa)
	DvirGJ17250	Uncharacterized protein. (5521 aa)
	DvirGJ23025	RNA helicase. (610 aa)
	spn-E	Probable ATP-dependent RNA helicase spindle-E; Probable ATP-binding RNA helicase which plays a central role during spermatogenesis and oogenesis by repressing transposable elements and preventing their mobilization, which is essential for the germline integrity. Acts via the piRNA metabolic process, which mediates the repression of transposable elements during meiosis by forming complexes composed of piRNAs and Piwi and govern the methylation and subsequent repression of transposons. Involved in the repression of LTR retrotransposon copia. Also involved in telomere regulation by repres [...] (1433 aa)
	DvirGJ23773	Uncharacterized protein. (1956 aa)
	DvirGJ24359	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (2250 aa)
	DvirGJ22884	Uncharacterized protein. (2179 aa)
	DvirGJ23450	ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily. (829 aa)
	DvirGJ24512	Uncharacterized protein; Belongs to the DEAD box helicase family. (399 aa)
	DvirGJ24541	Uncharacterized protein, isoform B. (1668 aa)
	DvirGJ24162	Uncharacterized protein, isoform A; Belongs to the DEAD box helicase family. (710 aa)
	DvirGJ24644	Uncharacterized protein. (1192 aa)
	DvirGJ23143	Uncharacterized protein, isoform A; Belongs to the DEAD box helicase family. (670 aa)
	vas	DEAD-box RNA helicase; Belongs to the DEAD box helicase family. (625 aa)
	DvirGJ16043	Uncharacterized protein; Belongs to the DEAD box helicase family. (537 aa)
	DvirGJ14697	Uncharacterized protein. (970 aa)
	DvirGJ14882	Uncharacterized protein. (1231 aa)
	DvirGJ18398	Uncharacterized protein. (1315 aa)
	DvirGJ16178	Uncharacterized protein; Belongs to the SNF2/RAD54 helicase family. SMARCAL1 subfamily. (714 aa)
	DvirGJ16231	Uncharacterized protein. (682 aa)
	DvirGJ14499	Uncharacterized protein, isoform A; Belongs to the DEAD box helicase family. (733 aa)
	DvirGJ14321	Uncharacterized protein. (2166 aa)
	DvirGJ15568	Uncharacterized protein. (564 aa)
	DvirGJ15570	RNA helicase. (806 aa)
	DvirGJ15571	RNA helicase. (531 aa)
	DvirGJ15886	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (692 aa)
	DvirGJ15737	Uncharacterized protein. (1157 aa)
	DvirGJ15745	Uncharacterized protein. (1182 aa)
	DvirGJ18332	Uncharacterized protein, isoform A. (693 aa)
	okr	DNA repair and recombination protein RAD54-like; Involved in mitotic DNA repair and meiotic recombination. Functions in the recombinational DNA repair pathway. Essential for interhomolog gene conversion (GC), but may have a less important role in intersister GC than spn-A/Rad51. In the presence of DNA, spn-A/Rad51 enhances the ATPase activity of okr/Rad54 (By similarity). (786 aa)
	DvirGJ17992	Uncharacterized protein. (894 aa)
	DvirGJ18233	Uncharacterized protein. (1069 aa)
	DvirGJ17053	Uncharacterized protein. (1242 aa)
	DvirGJ16398	Uncharacterized protein. (1292 aa)
	DvirGJ10048	Uncharacterized protein, isoform A. (1395 aa)
	DvirGJ11034	Uncharacterized protein. (820 aa)
	DvirGJ10137	Uncharacterized protein. (1061 aa)
	DvirGJ10883	Uncharacterized protein, isoform A. (1315 aa)
	DvirGJ19487	Uncharacterized protein, isoform A. (953 aa)

Your Current Organism:

Drosophila virilis

NCBI taxonomy Id: 7244
Other names: D. virilis

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Dbp80	DvirGJ11034	B4LE03	B4M504	Dead box protein 80.	Uncharacterized protein.	0.453
Dbp80	DvirGJ13954	B4LE03	B4LIG4	Dead box protein 80.	Uncharacterized protein, isoform A; Belongs to the DEAD box helicase family.	0.623
Dbp80	DvirGJ14882	B4LE03	B4MEU2	Dead box protein 80.	Uncharacterized protein.	0.488
Dbp80	DvirGJ15568	B4LE03	B4MB01	Dead box protein 80.	Uncharacterized protein.	0.584
Dbp80	DvirGJ15570	B4LE03	B4MAZ4	Dead box protein 80.	RNA helicase.	0.510
Dbp80	DvirGJ15571	B4LE03	B4MAZ3	Dead box protein 80.	RNA helicase.	0.515
Dbp80	DvirGJ15737	B4LE03	B4MA45	Dead box protein 80.	Uncharacterized protein.	0.555
Dbp80	DvirGJ15745	B4LE03	B4MA33	Dead box protein 80.	Uncharacterized protein.	0.458
Dbp80	DvirGJ16136	B4LE03	A0A0Q9WLS3	Dead box protein 80.	Uncharacterized protein, isoform B; Belongs to the DEAD box helicase family.	0.420
Dbp80	DvirGJ16231	B4LE03	B4MDD9	Dead box protein 80.	Uncharacterized protein.	0.501
Dbp80	DvirGJ17795	B4LE03	B4LTQ1	Dead box protein 80.	Uncharacterized protein.	0.453
Dbp80	DvirGJ17817	B4LE03	B4LU13	Dead box protein 80.	Uncharacterized protein.	0.498
Dbp80	DvirGJ17992	B4LE03	B4M936	Dead box protein 80.	Uncharacterized protein.	0.581
Dbp80	DvirGJ18233	B4LE03	B4M917	Dead box protein 80.	Uncharacterized protein.	0.695
Dbp80	DvirGJ18332	B4LE03	B4M9K0	Dead box protein 80.	Uncharacterized protein, isoform A.	0.468
Dbp80	DvirGJ18398	B4LE03	B4MDY4	Dead box protein 80.	Uncharacterized protein.	0.436
Dbp80	DvirGJ19298	B4LE03	B4M1G4	Dead box protein 80.	RNA helicase.	0.608
Dbp80	DvirGJ21042	B4LE03	B4LNR3	Dead box protein 80.	Uncharacterized protein.	0.501
Dbp80	DvirGJ21163	B4LE03	B4LM05	Dead box protein 80.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.451
Dbp80	DvirGJ21345	B4LE03	B4LP80	Dead box protein 80.	Uncharacterized protein.	0.432