(4 nodes) Nucleosome assembly protein (NAP) network (Drosophila virilis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DvirGJ10476	Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family. (288 aa)
	DvirGJ20453	Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family. (367 aa)
	DvirGJ23206	Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family. (265 aa)
	DvirGJ15359	Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family. (399 aa)

Your Current Organism:

Drosophila virilis

NCBI taxonomy Id: 7244
Other names: D. virilis

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DvirGJ10476	DvirGJ23206	B4M604	B4LZZ4	Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family.	Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family.	0.504
DvirGJ15359	DvirGJ23206	B4MD39	B4LZZ4	Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family.	Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family.	0.504
DvirGJ20453	DvirGJ23206	B4LNZ6	B4LZZ4	Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family.	Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family.	0.504
DvirGJ23206	DvirGJ10476	B4LZZ4	B4M604	Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family.	Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family.	0.504
DvirGJ23206	DvirGJ15359	B4LZZ4	B4MD39	Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family.	Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family.	0.504
DvirGJ23206	DvirGJ20453	B4LZZ4	B4LNZ6	Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family.	Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family.	0.504