(56 nodes) Olfactory receptor, insect network (Drosophila virilis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DvirGJ27111	Uncharacterized protein. (407 aa)
	DvirGJ15103	Odorant receptor. (409 aa)
	DvirGJ15072	Odorant receptor. (383 aa)
	DvirGJ15056	Odorant receptor. (393 aa)
	DvirGJ14787	Odorant receptor. (436 aa)
	DvirGJ18994	Odorant receptor. (422 aa)
	DvirGJ17804	Odorant receptor. (412 aa)
	DvirGJ18409	Odorant receptor. (400 aa)
	DvirGJ15327	Odorant receptor. (406 aa)
	DvirGJ17123	Uncharacterized protein. (261 aa)
	DvirGJ14456	Odorant receptor. (405 aa)
	DvirGJ14355	Odorant receptor. (383 aa)
	DvirGJ17936	Odorant receptor. (403 aa)
	DvirGJ16970	Odorant receptor. (426 aa)
	DvirGJ10682	Odorant receptor. (400 aa)
	DvirGJ24719	Odorant receptor. (484 aa)
	DvirGJ24721	Odorant receptor. (453 aa)
	DvirGJ11040	Odorant receptor. (471 aa)
	DvirGJ10340	Odorant receptor. (401 aa)
	DvirGJ19109	Odorant receptor. (405 aa)
	DvirGJ19501	Odorant receptor. (391 aa)
	DvirGJ19474	Odorant receptor. (383 aa)
	DvirGJ24062	Uncharacterized protein. (258 aa)
	DvirGJ24009	Odorant receptor. (419 aa)
	DvirGJ23238	Odorant receptor. (391 aa)
	DvirGJ23637	Odorant receptor. (392 aa)
	DvirGJ22952	Odorant receptor. (395 aa)
	DvirGJ23088	Odorant receptor. (401 aa)
	DvirGJ14423	Odorant receptor. (376 aa)
	DvirGJ17368	Odorant receptor. (390 aa)
	DvirGJ17260	Odorant receptor. (398 aa)
	DvirGJ10716	Odorant receptor. (464 aa)
	DvirGJ12647	Odorant receptor. (397 aa)
	DvirGJ22402	Odorant receptor. (393 aa)
	DvirGJ22509	Odorant receptor. (383 aa)
	DvirGJ21406	Odorant receptor. (429 aa)
	DvirGJ21288	Odorant receptor. (377 aa)
	DvirGJ19981	Odorant receptor. (375 aa)
	DvirGJ19982	Odorant receptor. (397 aa)
	DvirGJ19983	Odorant receptor. (375 aa)
	DvirGJ19984	Odorant receptor. (399 aa)
	DvirGJ20026	Odorant receptor. (350 aa)
	DvirGJ22195	Uncharacterized protein. (753 aa)
	DvirGJ22189	Odorant receptor. (371 aa)
	DvirGJ13366	Uncharacterized protein. (316 aa)
	DvirGJ13349	Odorant receptor. (420 aa)
	DvirGJ13657	Odorant receptor. (386 aa)
	DvirGJ11708	Odorant receptor. (404 aa)
	DvirGJ13035	Odorant receptor. (401 aa)
	DvirGJ13602	Odorant receptor. (420 aa)
	DvirGJ13974	Odorant receptor. (398 aa)
	DvirGJ11994	Uncharacterized protein. (264 aa)
	DvirGJ25630	Uncharacterized protein. (160 aa)
	DvirGJ10328	Uncharacterized protein. (204 aa)
	DvirGJ26779	Uncharacterized protein. (292 aa)
	DvirGJ26019	Uncharacterized protein. (501 aa)

Your Current Organism:

Drosophila virilis

NCBI taxonomy Id: 7244
Other names: D. virilis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DvirGJ10340	DvirGJ13657	B4M3W9	B4LER9	Odorant receptor.	Odorant receptor.	0.750
DvirGJ10340	DvirGJ17368	B4M3W9	B4LUS9	Odorant receptor.	Odorant receptor.	0.495
DvirGJ10340	DvirGJ18994	B4M3W9	B4MEC8	Odorant receptor.	Odorant receptor.	0.643
DvirGJ10340	DvirGJ21288	B4M3W9	B4LN83	Odorant receptor.	Odorant receptor.	0.545
DvirGJ10340	DvirGJ21406	B4M3W9	B4LPY3	Odorant receptor.	Odorant receptor.	0.567
DvirGJ10340	DvirGJ27111	B4M3W9	A0A0Q9WLB2	Odorant receptor.	Uncharacterized protein.	0.469
DvirGJ10716	DvirGJ24719	B4LT50	B4M5F7	Odorant receptor.	Odorant receptor.	0.442
DvirGJ12647	DvirGJ13657	B4LR53	B4LER9	Odorant receptor.	Odorant receptor.	0.527
DvirGJ12647	DvirGJ13974	B4LR53	B4LBH8	Odorant receptor.	Odorant receptor.	0.538
DvirGJ12647	DvirGJ19109	B4LR53	B4M2Z1	Odorant receptor.	Odorant receptor.	0.467
DvirGJ12647	DvirGJ21406	B4LR53	B4LPY3	Odorant receptor.	Odorant receptor.	0.579
DvirGJ12647	DvirGJ22189	B4LR53	B4LKA2	Odorant receptor.	Odorant receptor.	0.428
DvirGJ13035	DvirGJ13349	B4LEA3	B4LHR6	Odorant receptor.	Odorant receptor.	0.453
DvirGJ13035	DvirGJ14423	B4LEA3	B4LV09	Odorant receptor.	Odorant receptor.	0.596
DvirGJ13035	DvirGJ15056	B4LEA3	B4MFI5	Odorant receptor.	Odorant receptor.	0.448
DvirGJ13035	DvirGJ17260	B4LEA3	B4LU76	Odorant receptor.	Odorant receptor.	0.428
DvirGJ13035	DvirGJ22952	B4LEA3	B4LVA6	Odorant receptor.	Odorant receptor.	0.428
DvirGJ13035	DvirGJ24721	B4LEA3	B4M5F5	Odorant receptor.	Odorant receptor.	0.451
DvirGJ13349	DvirGJ13035	B4LHR6	B4LEA3	Odorant receptor.	Odorant receptor.	0.453
DvirGJ13349	DvirGJ13974	B4LHR6	B4LBH8	Odorant receptor.	Odorant receptor.	0.570