10 items (Drosophila virilis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DvirGJ11353	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (139 aa)
	DvirGJ13500	Uncharacterized protein. (435 aa)
	DvirGJ12253	Ribosomal_L7Ae domain-containing protein. (370 aa)
	DvirGJ11595	Ribosomal_L7Ae domain-containing protein. (160 aa)
	DvirGJ11507	eRF1_1 domain-containing protein. (438 aa)
	DvirGJ21062	Ribosomal_L7Ae domain-containing protein. (160 aa)
	DvirGJ13438	Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (394 aa)
	DvirGJ13428	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (127 aa)
	DvirGJ16679	Ribosomal_L7Ae domain-containing protein. (271 aa)
	DvirGJ18560	Ribosomal_L7Ae domain-containing protein. (111 aa)

Your Current Organism:

Drosophila virilis

NCBI taxonomy Id: 7244
Other names: D. virilis

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DvirGJ11353	DvirGJ11507	B4LBH1	B4LGF2	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	eRF1_1 domain-containing protein.	0.788
DvirGJ11353	DvirGJ13428	B4LBH1	B4LQD2	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.886
DvirGJ11353	DvirGJ13438	B4LBH1	B4LQD1	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs.	0.868
DvirGJ11353	DvirGJ16679	B4LBH1	B4M825	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	Ribosomal_L7Ae domain-containing protein.	0.999
DvirGJ11353	DvirGJ18560	B4LBH1	B4MGB7	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	Ribosomal_L7Ae domain-containing protein.	0.999
DvirGJ11507	DvirGJ11353	B4LGF2	B4LBH1	eRF1_1 domain-containing protein.	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	0.788
DvirGJ11507	DvirGJ11595	B4LGF2	B4LFM7	eRF1_1 domain-containing protein.	Ribosomal_L7Ae domain-containing protein.	0.607
DvirGJ11507	DvirGJ13428	B4LGF2	B4LQD2	eRF1_1 domain-containing protein.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.478
DvirGJ11507	DvirGJ13438	B4LGF2	B4LQD1	eRF1_1 domain-containing protein.	Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs.	0.687
DvirGJ11507	DvirGJ16679	B4LGF2	B4M825	eRF1_1 domain-containing protein.	Ribosomal_L7Ae domain-containing protein.	0.661
DvirGJ11507	DvirGJ18560	B4LGF2	B4MGB7	eRF1_1 domain-containing protein.	Ribosomal_L7Ae domain-containing protein.	0.653
DvirGJ11595	DvirGJ11507	B4LFM7	B4LGF2	Ribosomal_L7Ae domain-containing protein.	eRF1_1 domain-containing protein.	0.607
DvirGJ11595	DvirGJ13428	B4LFM7	B4LQD2	Ribosomal_L7Ae domain-containing protein.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.933
DvirGJ11595	DvirGJ13438	B4LFM7	B4LQD1	Ribosomal_L7Ae domain-containing protein.	Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs.	0.561
DvirGJ11595	DvirGJ18560	B4LFM7	B4MGB7	Ribosomal_L7Ae domain-containing protein.	Ribosomal_L7Ae domain-containing protein.	0.957
DvirGJ13428	DvirGJ11353	B4LQD2	B4LBH1	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	0.886
DvirGJ13428	DvirGJ11507	B4LQD2	B4LGF2	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	eRF1_1 domain-containing protein.	0.478
DvirGJ13428	DvirGJ11595	B4LQD2	B4LFM7	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	Ribosomal_L7Ae domain-containing protein.	0.933
DvirGJ13428	DvirGJ13438	B4LQD2	B4LQD1	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs.	0.544
DvirGJ13428	DvirGJ18560	B4LQD2	B4MGB7	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	Ribosomal_L7Ae domain-containing protein.	0.957