13 items (Drosophila virilis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DvirGJ21838	Uncharacterized protein, isoform B. (499 aa)
	DvirGJ17140	Reticulon-like protein. (615 aa)
	DvirGJ22286	Uncharacterized protein, isoform C. (210 aa)
	DvirGJ13467	LRRCT domain-containing protein. (770 aa)
	DvirGJ11400	Reticulon-like protein. (265 aa)
	DvirGJ20064	Uncharacterized protein. (198 aa)
	DvirGJ20945	TIR domain-containing protein; Belongs to the Toll-like receptor family. (1417 aa)
	DvirGJ20935	TIR domain-containing protein; Belongs to the Toll-like receptor family. (1443 aa)
	DvirGJ21421	Uncharacterized protein. (1367 aa)
	DvirGJ21058	Uncharacterized protein. (661 aa)
	DvirGJ10649	Uncharacterized protein. (1338 aa)
	DvirGJ15474	Uncharacterized protein, isoform A. (608 aa)
	DvirGJ11334	Uncharacterized protein, isoform B. (203 aa)

Your Current Organism:

Drosophila virilis

NCBI taxonomy Id: 7244
Other names: D. virilis

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DvirGJ11334	DvirGJ11400	A0A0Q9WVZ1	B4LHW8	Uncharacterized protein, isoform B.	Reticulon-like protein.	0.450
DvirGJ11334	DvirGJ17140	A0A0Q9WVZ1	A0A0Q9W9H7	Uncharacterized protein, isoform B.	Reticulon-like protein.	0.450
DvirGJ11334	DvirGJ20064	A0A0Q9WVZ1	B4LLE0	Uncharacterized protein, isoform B.	Uncharacterized protein.	0.958
DvirGJ11334	DvirGJ22286	A0A0Q9WVZ1	A0A0Q9WFZ7	Uncharacterized protein, isoform B.	Uncharacterized protein, isoform C.	0.958
DvirGJ11400	DvirGJ11334	B4LHW8	A0A0Q9WVZ1	Reticulon-like protein.	Uncharacterized protein, isoform B.	0.450
DvirGJ11400	DvirGJ20064	B4LHW8	B4LLE0	Reticulon-like protein.	Uncharacterized protein.	0.421
DvirGJ11400	DvirGJ22286	B4LHW8	A0A0Q9WFZ7	Reticulon-like protein.	Uncharacterized protein, isoform C.	0.421
DvirGJ17140	DvirGJ11334	A0A0Q9W9H7	A0A0Q9WVZ1	Reticulon-like protein.	Uncharacterized protein, isoform B.	0.450
DvirGJ17140	DvirGJ20064	A0A0Q9W9H7	B4LLE0	Reticulon-like protein.	Uncharacterized protein.	0.421
DvirGJ17140	DvirGJ22286	A0A0Q9W9H7	A0A0Q9WFZ7	Reticulon-like protein.	Uncharacterized protein, isoform C.	0.421
DvirGJ20064	DvirGJ11334	B4LLE0	A0A0Q9WVZ1	Uncharacterized protein.	Uncharacterized protein, isoform B.	0.958
DvirGJ20064	DvirGJ11400	B4LLE0	B4LHW8	Uncharacterized protein.	Reticulon-like protein.	0.421
DvirGJ20064	DvirGJ17140	B4LLE0	A0A0Q9W9H7	Uncharacterized protein.	Reticulon-like protein.	0.421
DvirGJ20064	DvirGJ22286	B4LLE0	A0A0Q9WFZ7	Uncharacterized protein.	Uncharacterized protein, isoform C.	0.901
DvirGJ22286	DvirGJ11334	A0A0Q9WFZ7	A0A0Q9WVZ1	Uncharacterized protein, isoform C.	Uncharacterized protein, isoform B.	0.958
DvirGJ22286	DvirGJ11400	A0A0Q9WFZ7	B4LHW8	Uncharacterized protein, isoform C.	Reticulon-like protein.	0.421
DvirGJ22286	DvirGJ17140	A0A0Q9WFZ7	A0A0Q9W9H7	Uncharacterized protein, isoform C.	Reticulon-like protein.	0.421
DvirGJ22286	DvirGJ20064	A0A0Q9WFZ7	B4LLE0	Uncharacterized protein, isoform C.	Uncharacterized protein.	0.901