12 items (Drosophila virilis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DvirGJ26712	Uncharacterized protein. (146 aa)
	DvirGJ14519	Uncharacterized protein. (376 aa)
	DvirGJ24191	Signal transducer and activator of transcription. (848 aa)
	DvirGJ13412	Uncharacterized protein. (1241 aa)
	DvirGJ13062	Uncharacterized protein. (271 aa)
	DvirGJ21359	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. (1718 aa)
	DvirGJ24689	Uncharacterized protein. (513 aa)
	DvirGJ24290	Uncharacterized protein, isoform A; Belongs to the PI3/PI4-kinase family. (1076 aa)
	DvirGJ24563	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (436 aa)
	DvirGJ19060	Uncharacterized protein, isoform A. (3142 aa)
	DvirGJ14521	Uncharacterized protein. (1004 aa)
	Rpd3	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (527 aa)

Your Current Organism:

Drosophila virilis

NCBI taxonomy Id: 7244
Other names: D. virilis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DvirGJ14519	DvirGJ14521	A0A0Q9WBY6	B4MBW0	Uncharacterized protein.	Uncharacterized protein.	0.879
DvirGJ14519	DvirGJ24191	A0A0Q9WBY6	A0A0Q9WFM5	Uncharacterized protein.	Signal transducer and activator of transcription.	0.530
DvirGJ14521	DvirGJ14519	B4MBW0	A0A0Q9WBY6	Uncharacterized protein.	Uncharacterized protein.	0.879
DvirGJ14521	DvirGJ24191	B4MBW0	A0A0Q9WFM5	Uncharacterized protein.	Signal transducer and activator of transcription.	0.530
DvirGJ19060	DvirGJ24191	B4M2X2	A0A0Q9WFM5	Uncharacterized protein, isoform A.	Signal transducer and activator of transcription.	0.867
DvirGJ19060	DvirGJ24563	B4M2X2	B4LZC0	Uncharacterized protein, isoform A.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.772
DvirGJ19060	Rpd3	B4M2X2	B4MFY7	Uncharacterized protein, isoform A.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.772
DvirGJ21359	DvirGJ24191	B4LPA2	A0A0Q9WFM5	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Signal transducer and activator of transcription.	0.596
DvirGJ21359	DvirGJ24290	B4LPA2	B4LWM3	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Uncharacterized protein, isoform A; Belongs to the PI3/PI4-kinase family.	0.607
DvirGJ21359	DvirGJ24689	B4LPA2	B4LU46	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Uncharacterized protein.	0.585
DvirGJ24191	DvirGJ14519	A0A0Q9WFM5	A0A0Q9WBY6	Signal transducer and activator of transcription.	Uncharacterized protein.	0.530
DvirGJ24191	DvirGJ14521	A0A0Q9WFM5	B4MBW0	Signal transducer and activator of transcription.	Uncharacterized protein.	0.530
DvirGJ24191	DvirGJ19060	A0A0Q9WFM5	B4M2X2	Signal transducer and activator of transcription.	Uncharacterized protein, isoform A.	0.867
DvirGJ24191	DvirGJ21359	A0A0Q9WFM5	B4LPA2	Signal transducer and activator of transcription.	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.596
DvirGJ24191	DvirGJ24563	A0A0Q9WFM5	B4LZC0	Signal transducer and activator of transcription.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.716
DvirGJ24191	DvirGJ24689	A0A0Q9WFM5	B4LU46	Signal transducer and activator of transcription.	Uncharacterized protein.	0.534
DvirGJ24191	DvirGJ26712	A0A0Q9WFM5	A0A0Q9VZR1	Signal transducer and activator of transcription.	Uncharacterized protein.	0.530
DvirGJ24191	Rpd3	A0A0Q9WFM5	B4MFY7	Signal transducer and activator of transcription.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.716
DvirGJ24290	DvirGJ21359	B4LWM3	B4LPA2	Uncharacterized protein, isoform A; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.607
DvirGJ24290	DvirGJ24689	B4LWM3	B4LU46	Uncharacterized protein, isoform A; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.999