31 items (Drosophila virilis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DvirGJ21825	Uncharacterized protein. (915 aa)
	DvirGJ13556	Uncharacterized protein. (622 aa)
	DvirGJ17559	Uncharacterized protein. (1253 aa)
	Rpd3	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (527 aa)
	DvirGJ15743	Uncharacterized protein, isoform D. (885 aa)
	DvirGJ23199	Uncharacterized protein, isoform B. (430 aa)
	DvirGJ12809	P66_CC domain-containing protein. (936 aa)
	DvirGJ13998	Uncharacterized protein. (2012 aa)
	DvirGJ14051	Uncharacterized protein, isoform A. (545 aa)
	DvirGJ11835	Uncharacterized protein, isoform A. (668 aa)
	DvirGJ11669	Uncharacterized protein. (303 aa)
	DvirGJ11550	SWIRM domain-containing protein. (900 aa)
	DvirGJ20289	Uncharacterized protein. (610 aa)
	DvirGJ20278	EF-hand domain-containing protein. (672 aa)
	DvirGJ20087	Uncharacterized protein. (596 aa)
	DvirGJ21237	Uncharacterized protein. (683 aa)
	DvirGJ20542	HMG box domain-containing protein. (397 aa)
	DvirGJ11036	Uncharacterized protein, isoform A. (2232 aa)
	DvirGJ16856	Uncharacterized protein. (758 aa)
	DvirGJ23830	Histone deacetylase complex subunit SAP18; Involved in the tethering of the SIN3 complex to core histone proteins. (149 aa)
	DvirGJ18815	Uncharacterized protein. (174 aa)
	DvirGJ19523	Uncharacterized protein, isoform A. (708 aa)
	DvirGJ19114	ARID domain-containing protein. (2417 aa)
	DvirGJ10798	Uncharacterized protein. (927 aa)
	DvirGJ10855	Uncharacterized protein. (593 aa)
	DvirGJ10882	Uncharacterized protein. (500 aa)
	DvirGJ10907	Uncharacterized protein, isoform A. (342 aa)
	DvirGJ16917	Uncharacterized protein. (269 aa)
	DvirGJ15679	Uncharacterized protein, isoform A. (3219 aa)
	DvirGJ15609	Uncharacterized protein. (398 aa)
	DvirGJ15087	Uncharacterized protein. (667 aa)

Your Current Organism:

Drosophila virilis

NCBI taxonomy Id: 7244
Other names: D. virilis

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DvirGJ10798	DvirGJ10907	B4M3T6	B4M4B3	Uncharacterized protein.	Uncharacterized protein, isoform A.	0.985
DvirGJ10798	DvirGJ11550	B4M3T6	B4LG07	Uncharacterized protein.	SWIRM domain-containing protein.	0.768
DvirGJ10798	DvirGJ11669	B4M3T6	B4LF57	Uncharacterized protein.	Uncharacterized protein.	0.842
DvirGJ10798	DvirGJ12809	B4M3T6	B4LB53	Uncharacterized protein.	P66_CC domain-containing protein.	0.948
DvirGJ10798	DvirGJ13998	B4M3T6	B4LBL9	Uncharacterized protein.	Uncharacterized protein.	0.969
DvirGJ10798	DvirGJ15609	B4M3T6	B4MAS5	Uncharacterized protein.	Uncharacterized protein.	0.662
DvirGJ10798	DvirGJ15743	B4M3T6	A0A0Q9WD41	Uncharacterized protein.	Uncharacterized protein, isoform D.	0.640
DvirGJ10798	DvirGJ16917	B4M3T6	B4M751	Uncharacterized protein.	Uncharacterized protein.	0.527
DvirGJ10798	DvirGJ18815	B4M3T6	B4M1N7	Uncharacterized protein.	Uncharacterized protein.	0.628
DvirGJ10798	DvirGJ19114	B4M3T6	B4M2Z7	Uncharacterized protein.	ARID domain-containing protein.	0.452
DvirGJ10798	DvirGJ19523	B4M3T6	B4M2M9	Uncharacterized protein.	Uncharacterized protein, isoform A.	0.842
DvirGJ10798	DvirGJ23199	B4M3T6	A0A0Q9WQW4	Uncharacterized protein.	Uncharacterized protein, isoform B.	0.998
DvirGJ10798	DvirGJ23830	B4M3T6	B4LY00	Uncharacterized protein.	Histone deacetylase complex subunit SAP18; Involved in the tethering of the SIN3 complex to core histone proteins.	0.623
DvirGJ10798	Rpd3	B4M3T6	B4MFY7	Uncharacterized protein.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.939
DvirGJ10907	DvirGJ10798	B4M4B3	B4M3T6	Uncharacterized protein, isoform A.	Uncharacterized protein.	0.985
DvirGJ10907	DvirGJ11550	B4M4B3	B4LG07	Uncharacterized protein, isoform A.	SWIRM domain-containing protein.	0.691
DvirGJ10907	DvirGJ11669	B4M4B3	B4LF57	Uncharacterized protein, isoform A.	Uncharacterized protein.	0.644
DvirGJ10907	DvirGJ12809	B4M4B3	B4LB53	Uncharacterized protein, isoform A.	P66_CC domain-containing protein.	0.953
DvirGJ10907	DvirGJ13998	B4M4B3	B4LBL9	Uncharacterized protein, isoform A.	Uncharacterized protein.	0.959
DvirGJ10907	DvirGJ15609	B4M4B3	B4MAS5	Uncharacterized protein, isoform A.	Uncharacterized protein.	0.620