35 items (Drosophila virilis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DvirGJ16133	Uncharacterized protein; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (944 aa)
	DvirGJ15548	Uncharacterized protein. (902 aa)
	DvirGJ17913	Uncharacterized protein; Belongs to the protein kinase superfamily. (353 aa)
	DvirGJ16570	ZZ-type domain-containing protein. (718 aa)
	DvirGJ16846	Uncharacterized protein. (3730 aa)
	DvirGJ10940	PBPe domain-containing protein. (658 aa)
	DvirGJ19187	Uncharacterized protein, isoform B. (264 aa)
	DvirGJ18812	Non-specific serine/threonine protein kinase. (876 aa)
	DvirGJ26556	PBPe domain-containing protein. (669 aa)
	DvirGJ22727	Uncharacterized protein, isoform P. (3636 aa)
	DvirGJ25695	Uncharacterized protein, isoform A. (101 aa)
	DvirGJ16841	Uncharacterized protein, isoform C. (70 aa)
	DvirGJ11138	Uncharacterized protein, isoform B. (762 aa)
	DvirGJ12814	Uncharacterized protein, isoform D. (428 aa)
	DvirGJ16390	Uncharacterized protein, isoform C. (968 aa)
	DvirGJ13401	PBPe domain-containing protein. (855 aa)
	DvirGJ20463	Uncharacterized protein, isoform B. (531 aa)
	DvirGJ19665	Uncharacterized protein, isoform A; Belongs to the protein kinase superfamily. (428 aa)
	DvirGJ11565	PBPe domain-containing protein. (632 aa)
	DvirGJ24269	PBPe domain-containing protein. (864 aa)
	DvirGJ22991	Uncharacterized protein, isoform A; Belongs to the protein kinase superfamily. (354 aa)
	DvirGJ12753	Uncharacterized protein. (1103 aa)
	DvirGJ13380	Uncharacterized protein. (991 aa)
	DvirGJ13946	PBPe domain-containing protein. (562 aa)
	DvirGJ13947	PBPe domain-containing protein. (623 aa)
	DvirGJ21160	Uncharacterized protein, isoform A. (377 aa)
	DvirGJ20430	PPM-type phosphatase domain-containing protein. (446 aa)
	DvirGJ22992	Uncharacterized protein. (357 aa)
	DVIR88_6g0060	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (422 aa)
	DvirGJ23122	Uncharacterized protein. (450 aa)
	Nmdar1	Glutamate [NMDA] receptor subunit 1; NMDA receptor subtype of glutamate-gated ion channels with high calcium permeability and voltage-dependent sensitivity to magnesium. Mediated by glycine. This protein plays a key role in synaptic plasticity, synaptogenesis, excitotoxicity, memory acquisition and learning. It mediates neuronal functions in glutamate neurotransmission. Is involved in the cell surface targeting of NMDA receptors. Plays a role in associative learning and in long-term memory consolidation (By similarity). (984 aa)
	DvirGJ26009	PBPe domain-containing protein. (627 aa)
	DvirGJ13114	Uncharacterized protein, isoform D. (777 aa)
	DvirGJ14169	Uncharacterized protein. (2693 aa)
	DvirGJ15244	Uncharacterized protein, isoform AA; Belongs to the MAGUK family. (1334 aa)

Your Current Organism:

Drosophila virilis

NCBI taxonomy Id: 7244
Other names: D. virilis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DVIR88_6g0060	DvirGJ19187	D0Z7B0	B4M3C3	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein, isoform B.	0.511
DVIR88_6g0060	DvirGJ20463	D0Z7B0	D0Z795	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Uncharacterized protein, isoform B.	0.499
DVIR88_6g0060	Nmdar1	D0Z7B0	B4LZB5	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	Glutamate [NMDA] receptor subunit 1; NMDA receptor subtype of glutamate-gated ion channels with high calcium permeability and voltage-dependent sensitivity to magnesium. Mediated by glycine. This protein plays a key role in synaptic plasticity, synaptogenesis, excitotoxicity, memory acquisition and learning. It mediates neuronal functions in glutamate neurotransmission. Is involved in the cell surface targeting of NMDA receptors. Plays a role in associative learning and in long-term memory consolidation (By similarity).	0.450
DvirGJ10940	DvirGJ11565	B4M4H3	B4LFY5	PBPe domain-containing protein.	PBPe domain-containing protein.	0.628
DvirGJ10940	DvirGJ16133	B4M4H3	B4MDP5	PBPe domain-containing protein.	Uncharacterized protein; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.	0.485
DvirGJ10940	DvirGJ24269	B4M4H3	B4LWJ3	PBPe domain-containing protein.	PBPe domain-containing protein.	0.496
DvirGJ11565	DvirGJ10940	B4LFY5	B4M4H3	PBPe domain-containing protein.	PBPe domain-containing protein.	0.628
DvirGJ11565	DvirGJ13401	B4LFY5	B4LBC8	PBPe domain-containing protein.	PBPe domain-containing protein.	0.572
DvirGJ11565	DvirGJ13947	B4LFY5	B4LIF8	PBPe domain-containing protein.	PBPe domain-containing protein.	0.635
DvirGJ11565	DvirGJ26009	B4LFY5	A0A0Q9WK24	PBPe domain-containing protein.	PBPe domain-containing protein.	0.437
DvirGJ11565	DvirGJ26556	B4LFY5	A0A0Q9W8F1	PBPe domain-containing protein.	PBPe domain-containing protein.	0.575
DvirGJ12753	DvirGJ15244	B4LHH3	A0A0Q9W898	Uncharacterized protein.	Uncharacterized protein, isoform AA; Belongs to the MAGUK family.	0.539
DvirGJ12753	DvirGJ15548	B4LHH3	B4MB33	Uncharacterized protein.	Uncharacterized protein.	0.418
DvirGJ12753	DvirGJ20463	B4LHH3	D0Z795	Uncharacterized protein.	Uncharacterized protein, isoform B.	0.585
DvirGJ12753	Nmdar1	B4LHH3	B4LZB5	Uncharacterized protein.	Glutamate [NMDA] receptor subunit 1; NMDA receptor subtype of glutamate-gated ion channels with high calcium permeability and voltage-dependent sensitivity to magnesium. Mediated by glycine. This protein plays a key role in synaptic plasticity, synaptogenesis, excitotoxicity, memory acquisition and learning. It mediates neuronal functions in glutamate neurotransmission. Is involved in the cell surface targeting of NMDA receptors. Plays a role in associative learning and in long-term memory consolidation (By similarity).	0.538
DvirGJ12814	DvirGJ17913	A0A0Q9WGM8	B4M9H6	Uncharacterized protein, isoform D.	Uncharacterized protein; Belongs to the protein kinase superfamily.	0.981
DvirGJ12814	DvirGJ22991	A0A0Q9WGM8	B4LW66	Uncharacterized protein, isoform D.	Uncharacterized protein, isoform A; Belongs to the protein kinase superfamily.	0.977
DvirGJ12814	DvirGJ22992	A0A0Q9WGM8	B4LW65	Uncharacterized protein, isoform D.	Uncharacterized protein.	0.978
DvirGJ13114	DvirGJ20463	A0A0Q9WIR1	D0Z795	Uncharacterized protein, isoform D.	Uncharacterized protein, isoform B.	0.406
DvirGJ13380	DvirGJ15244	B4LIB6	A0A0Q9W898	Uncharacterized protein.	Uncharacterized protein, isoform AA; Belongs to the MAGUK family.	0.539