51 items (Drosophila virilis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DvirGJ15704	Uncharacterized protein. (363 aa)
	DvirGJ14876	Uncharacterized protein. (200 aa)
	DvirGJ17697	Uncharacterized protein, isoform A. (311 aa)
	DvirGJ16308	Vps53_N domain-containing protein. (893 aa)
	DvirGJ14275	Uncharacterized protein. (750 aa)
	DvirGJ14333	Uncharacterized protein. (751 aa)
	DvirGJ15864	Uncharacterized protein. (745 aa)
	DvirGJ15770	Uncharacterized protein, isoform A; Belongs to the syntaxin family. (363 aa)
	DvirGJ17862	Uncharacterized protein. (946 aa)
	DvirGJ18323	Sm domain-containing protein. (117 aa)
	DvirGJ18258	Uncharacterized protein. (270 aa)
	DvirGJ16551	TMF_TATA_bd domain-containing protein. (970 aa)
	DvirGJ10669	Uncharacterized protein. (709 aa)
	DvirGJ10064	Uncharacterized protein. (896 aa)
	DvirGJ10134	Protein SYS1 homolog; Involved in protein trafficking. Belongs to the SYS1 family. (160 aa)
	DvirGJ10143	Uncharacterized protein. (432 aa)
	DvirGJ18937	Uncharacterized protein, isoform A. (391 aa)
	DvirGJ24647	Uncharacterized protein. (623 aa)
	DvirGJ24048	Uncharacterized protein. (135 aa)
	DvirGJ23981	GRIP domain-containing protein. (692 aa)
	DvirGJ23979	AH domain-containing protein. (346 aa)
	DvirGJ22959	Uncharacterized protein. (900 aa)
	DvirGJ23532	GRIP domain-containing protein. (1131 aa)
	DvirGJ14587	Cog4 domain-containing protein. (781 aa)
	DvirGJ17287	Uncharacterized protein, isoform A. (526 aa)
	DvirGJ17821	Uncharacterized protein. (658 aa)
	DvirGJ17776	Uncharacterized protein. (196 aa)
	DvirGJ20316	Uncharacterized protein. (766 aa)
	DvirGJ20636	Uncharacterized protein. (916 aa)
	DvirGJ20647	Uncharacterized protein. (208 aa)
	DvirGJ14899	Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family. (574 aa)
	DvirGJ21049	GRIP domain-containing protein. (616 aa)
	DvirGJ20485	Uncharacterized protein. (304 aa)
	DvirGJ22359	Uncharacterized protein, isoform A. (1487 aa)
	DvirGJ20156	Uncharacterized protein, isoform A. (152 aa)
	DvirGJ22137	Uncharacterized protein, isoform A. (802 aa)
	DvirGJ21521	Uncharacterized protein, isoform B. (607 aa)
	DvirGJ22100	Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function. (625 aa)
	DvirGJ22073	Uncharacterized protein. (747 aa)
	DvirGJ12627	Uncharacterized protein. (787 aa)
	DvirGJ13238	t-SNARE coiled-coil homology domain-containing protein. (230 aa)
	DvirGJ11580	Uncharacterized protein. (292 aa)
	DvirGJ11773	RIC1 domain-containing protein. (1420 aa)
	DvirGJ13575	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (180 aa)
	DvirGJ12469	N-acetyltransferase domain-containing protein. (172 aa)
	DvirGJ12523	Uncharacterized protein. (275 aa)
	DvirGJ12605	t-SNARE coiled-coil homology domain-containing protein. (229 aa)
	DvirGJ22586	Uncharacterized protein, isoform B; Belongs to the perilipin family. (409 aa)
	DvirGJ18639	Uncharacterized protein, isoform E. (784 aa)
	DvirGJ13292	Uncharacterized protein, isoform B. (755 aa)
	DvirGJ12544	Uncharacterized protein, isoform E. (203 aa)

Your Current Organism:

Drosophila virilis

NCBI taxonomy Id: 7244
Other names: D. virilis

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DvirGJ10064	DvirGJ10143	B4M5B1	B4M4Y2	Uncharacterized protein.	Uncharacterized protein.	0.631
DvirGJ10064	DvirGJ10669	B4M5B1	B4M5Z3	Uncharacterized protein.	Uncharacterized protein.	0.997
DvirGJ10064	DvirGJ11773	B4M5B1	B4LE10	Uncharacterized protein.	RIC1 domain-containing protein.	0.680
DvirGJ10064	DvirGJ12605	B4M5B1	B4LB42	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.560
DvirGJ10064	DvirGJ13238	B4M5B1	B4LGK2	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.791
DvirGJ10064	DvirGJ13575	B4M5B1	B4LDZ5	Uncharacterized protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.657
DvirGJ10064	DvirGJ14275	B4M5B1	B4MBN1	Uncharacterized protein.	Uncharacterized protein.	0.570
DvirGJ10064	DvirGJ14333	B4M5B1	B4MB95	Uncharacterized protein.	Uncharacterized protein.	0.997
DvirGJ10064	DvirGJ14587	B4M5B1	B4LVB3	Uncharacterized protein.	Cog4 domain-containing protein.	0.995
DvirGJ10064	DvirGJ14876	B4M5B1	B4MET2	Uncharacterized protein.	Uncharacterized protein.	0.655
DvirGJ10064	DvirGJ14899	B4M5B1	B4LQF0	Uncharacterized protein.	Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.	0.997
DvirGJ10064	DvirGJ15770	B4M5B1	B4M9Z8	Uncharacterized protein.	Uncharacterized protein, isoform A; Belongs to the syntaxin family.	0.827
DvirGJ10064	DvirGJ15864	B4M5B1	B4MA92	Uncharacterized protein.	Uncharacterized protein.	0.570
DvirGJ10064	DvirGJ16308	B4M5B1	B4MDS2	Uncharacterized protein.	Vps53_N domain-containing protein.	0.816
DvirGJ10064	DvirGJ16551	B4M5B1	B4M6Y9	Uncharacterized protein.	TMF_TATA_bd domain-containing protein.	0.655
DvirGJ10064	DvirGJ17697	B4M5B1	B4ME11	Uncharacterized protein.	Uncharacterized protein, isoform A.	0.645
DvirGJ10064	DvirGJ17776	B4M5B1	B4LTL4	Uncharacterized protein.	Uncharacterized protein.	0.520
DvirGJ10064	DvirGJ17821	B4M5B1	B4LU18	Uncharacterized protein.	Uncharacterized protein.	0.807
DvirGJ10064	DvirGJ17862	B4M5B1	B4M9R9	Uncharacterized protein.	Uncharacterized protein.	0.730
DvirGJ10064	DvirGJ20316	B4M5B1	B4LSU0	Uncharacterized protein.	Uncharacterized protein.	0.997