(6 nodes) UDP-N-acetylglucosamine transferase complex, and Glycosyl transferases group 1 network (Drosophila willistoni)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DwilGK23958	Uncharacterized protein. (412 aa)
	DwilGK20298	Uncharacterized protein. (511 aa)
	DwilGK17759	Uncharacterized protein. (421 aa)
	DwilGK11839	Uncharacterized protein. (450 aa)
	DwilGK11188	Glyco_tran_28_C domain-containing protein. (172 aa)
	DwilGK25441	Uncharacterized protein. (185 aa)

Your Current Organism:

Drosophila willistoni

NCBI taxonomy Id: 7260
Other names: D. willistoni

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DwilGK11188	DwilGK11839	B4NBG3	B4NB71	Glyco_tran_28_C domain-containing protein.	Uncharacterized protein.	0.986
DwilGK11188	DwilGK17759	B4NBG3	B4N6C6	Glyco_tran_28_C domain-containing protein.	Uncharacterized protein.	0.750
DwilGK11188	DwilGK20298	B4NBG3	B4MXP7	Glyco_tran_28_C domain-containing protein.	Uncharacterized protein.	0.822
DwilGK11188	DwilGK23958	B4NBG3	B4MU27	Glyco_tran_28_C domain-containing protein.	Uncharacterized protein.	0.992
DwilGK11188	DwilGK25441	B4NBG3	B4NDM5	Glyco_tran_28_C domain-containing protein.	Uncharacterized protein.	0.997
DwilGK11839	DwilGK11188	B4NB71	B4NBG3	Uncharacterized protein.	Glyco_tran_28_C domain-containing protein.	0.986
DwilGK11839	DwilGK17759	B4NB71	B4N6C6	Uncharacterized protein.	Uncharacterized protein.	0.991
DwilGK11839	DwilGK20298	B4NB71	B4MXP7	Uncharacterized protein.	Uncharacterized protein.	0.718
DwilGK11839	DwilGK23958	B4NB71	B4MU27	Uncharacterized protein.	Uncharacterized protein.	0.769
DwilGK11839	DwilGK25441	B4NB71	B4NDM5	Uncharacterized protein.	Uncharacterized protein.	0.974
DwilGK17759	DwilGK11188	B4N6C6	B4NBG3	Uncharacterized protein.	Glyco_tran_28_C domain-containing protein.	0.750
DwilGK17759	DwilGK11839	B4N6C6	B4NB71	Uncharacterized protein.	Uncharacterized protein.	0.991
DwilGK17759	DwilGK20298	B4N6C6	B4MXP7	Uncharacterized protein.	Uncharacterized protein.	0.966
DwilGK17759	DwilGK23958	B4N6C6	B4MU27	Uncharacterized protein.	Uncharacterized protein.	0.689
DwilGK17759	DwilGK25441	B4N6C6	B4NDM5	Uncharacterized protein.	Uncharacterized protein.	0.632
DwilGK20298	DwilGK11188	B4MXP7	B4NBG3	Uncharacterized protein.	Glyco_tran_28_C domain-containing protein.	0.822
DwilGK20298	DwilGK11839	B4MXP7	B4NB71	Uncharacterized protein.	Uncharacterized protein.	0.718
DwilGK20298	DwilGK17759	B4MXP7	B4N6C6	Uncharacterized protein.	Uncharacterized protein.	0.966
DwilGK20298	DwilGK23958	B4MXP7	B4MU27	Uncharacterized protein.	Uncharacterized protein.	0.769
DwilGK20298	DwilGK25441	B4MXP7	B4NDM5	Uncharacterized protein.	Uncharacterized protein.	0.733