(16 nodes) Mixed, incl. Ubiquilin, and XPC-binding domain network (Drosophila willistoni)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DwilGK20890	Uncharacterized protein. (884 aa)
	DwilGK16957	Uncharacterized protein. (364 aa)
	DwilGK20481	Uncharacterized protein. (611 aa)
	DwilGK22046	PAW domain-containing protein. (639 aa)
	DwilGK18107	U-box domain-containing protein. (1001 aa)
	DwilGK24164	Uncharacterized protein. (1063 aa)
	DwilGK23617	Uncharacterized protein. (1228 aa)
	DwilGK11419	Uncharacterized protein. (693 aa)
	DwilGK11781	Uncharacterized protein. (1598 aa)
	DwilGK11154	Uncharacterized protein. (284 aa)
	DwilGK25071	Uncharacterized protein. (572 aa)
	DwilGK22461	Uncharacterized protein. (2454 aa)
	DwilGK13131	Uncharacterized protein, isoform A. (505 aa)
	DwilGK13711	Uncharacterized protein. (420 aa)
	DwilGK13535	Ubiquitin-like domain-containing protein. (373 aa)
	DwilGK13251	Uncharacterized protein. (412 aa)

Your Current Organism:

Drosophila willistoni

NCBI taxonomy Id: 7260
Other names: D. willistoni

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DwilGK11154	DwilGK11419	B4NBN7	B4NA73	Uncharacterized protein.	Uncharacterized protein.	0.422
DwilGK11154	DwilGK11781	B4NBN7	B4NAU6	Uncharacterized protein.	Uncharacterized protein.	0.493
DwilGK11154	DwilGK13131	B4NBN7	B4NGV4	Uncharacterized protein.	Uncharacterized protein, isoform A.	0.727
DwilGK11154	DwilGK13251	B4NBN7	B4NL33	Uncharacterized protein.	Uncharacterized protein.	0.617
DwilGK11154	DwilGK13535	B4NBN7	B4NIC6	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.699
DwilGK11154	DwilGK13711	B4NBN7	B4NHX4	Uncharacterized protein.	Uncharacterized protein.	0.946
DwilGK11154	DwilGK18107	B4NBN7	B4MZC8	Uncharacterized protein.	U-box domain-containing protein.	0.817
DwilGK11154	DwilGK20481	B4NBN7	B4MXT2	Uncharacterized protein.	Uncharacterized protein.	0.831
DwilGK11154	DwilGK20890	B4NBN7	B4MJT2	Uncharacterized protein.	Uncharacterized protein.	0.969
DwilGK11154	DwilGK22046	B4NBN7	B4MYN5	Uncharacterized protein.	PAW domain-containing protein.	0.967
DwilGK11154	DwilGK22461	B4NBN7	B4NFV0	Uncharacterized protein.	Uncharacterized protein.	0.767
DwilGK11154	DwilGK23617	B4NBN7	B4N730	Uncharacterized protein.	Uncharacterized protein.	0.782
DwilGK11154	DwilGK24164	B4NBN7	B4N0Y3	Uncharacterized protein.	Uncharacterized protein.	0.782
DwilGK11154	DwilGK25071	B4NBN7	B4NCJ5	Uncharacterized protein.	Uncharacterized protein.	0.699
DwilGK11419	DwilGK11154	B4NA73	B4NBN7	Uncharacterized protein.	Uncharacterized protein.	0.422
DwilGK11419	DwilGK13251	B4NA73	B4NL33	Uncharacterized protein.	Uncharacterized protein.	0.415
DwilGK11419	DwilGK13535	B4NA73	B4NIC6	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.415
DwilGK11419	DwilGK13711	B4NA73	B4NHX4	Uncharacterized protein.	Uncharacterized protein.	0.422
DwilGK11419	DwilGK20481	B4NA73	B4MXT2	Uncharacterized protein.	Uncharacterized protein.	0.440
DwilGK11419	DwilGK23617	B4NA73	B4N730	Uncharacterized protein.	Uncharacterized protein.	0.851