(11 nodes) Dystrophin-associated glycoprotein complex network (Drosophila willistoni)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DwilGK13816	Uncharacterized protein. (2276 aa)
	DwilGK12845	Uncharacterized protein. (366 aa)
	DwilGK13817	Uncharacterized protein. (1950 aa)
	DwilGK27497	Uncharacterized protein. (658 aa)
	DwilGK28214	Uncharacterized protein. (695 aa)
	DwilGK17120	PDZ domain-containing protein. (652 aa)
	DwilGK21704	GK21704. (515 aa)
	DwilGK15542	CADG domain-containing protein. (445 aa)
	DwilGK22187	Dystrobrevin. (588 aa)
	DwilGK10138	Uncharacterized protein. (461 aa)
	DwilGK25303	Uncharacterized protein. (338 aa)

Your Current Organism:

Drosophila willistoni

NCBI taxonomy Id: 7260
Other names: D. willistoni

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DwilGK10138	DwilGK13817	B4ND17	B4NJ30	Uncharacterized protein.	Uncharacterized protein.	0.504
DwilGK10138	DwilGK15542	B4ND17	B4MWV3	Uncharacterized protein.	CADG domain-containing protein.	0.744
DwilGK10138	DwilGK17120	B4ND17	B4MNE8	Uncharacterized protein.	PDZ domain-containing protein.	0.564
DwilGK10138	DwilGK22187	B4ND17	B4MYA9	Uncharacterized protein.	Dystrobrevin.	0.675
DwilGK10138	DwilGK25303	B4ND17	B4NEE8	Uncharacterized protein.	Uncharacterized protein.	0.754
DwilGK10138	DwilGK27497	B4ND17	A0A0Q9WVU4	Uncharacterized protein.	Uncharacterized protein.	0.800
DwilGK12845	DwilGK13817	B4NJF0	B4NJ30	Uncharacterized protein.	Uncharacterized protein.	0.426
DwilGK12845	DwilGK15542	B4NJF0	B4MWV3	Uncharacterized protein.	CADG domain-containing protein.	0.434
DwilGK12845	DwilGK25303	B4NJF0	B4NEE8	Uncharacterized protein.	Uncharacterized protein.	0.419
DwilGK12845	DwilGK27497	B4NJF0	A0A0Q9WVU4	Uncharacterized protein.	Uncharacterized protein.	0.426
DwilGK13816	DwilGK13817	B4NJ28	B4NJ30	Uncharacterized protein.	Uncharacterized protein.	0.899
DwilGK13816	DwilGK17120	B4NJ28	B4MNE8	Uncharacterized protein.	PDZ domain-containing protein.	0.593
DwilGK13816	DwilGK21704	B4NJ28	B4MPH6	Uncharacterized protein.	GK21704.	0.457
DwilGK13816	DwilGK22187	B4NJ28	B4MYA9	Uncharacterized protein.	Dystrobrevin.	0.606
DwilGK13816	DwilGK27497	B4NJ28	A0A0Q9WVU4	Uncharacterized protein.	Uncharacterized protein.	0.641
DwilGK13817	DwilGK10138	B4NJ30	B4ND17	Uncharacterized protein.	Uncharacterized protein.	0.504
DwilGK13817	DwilGK12845	B4NJ30	B4NJF0	Uncharacterized protein.	Uncharacterized protein.	0.426
DwilGK13817	DwilGK13816	B4NJ30	B4NJ28	Uncharacterized protein.	Uncharacterized protein.	0.899
DwilGK13817	DwilGK15542	B4NJ30	B4MWV3	Uncharacterized protein.	CADG domain-containing protein.	0.548
DwilGK13817	DwilGK17120	B4NJ30	B4MNE8	Uncharacterized protein.	PDZ domain-containing protein.	0.728