(7 nodes) PAS fold network (Drosophila willistoni)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DwilGK11420	Uncharacterized protein. (651 aa)
	DwilGK10105	Uncharacterized protein. (958 aa)
	DwilGK20151	Uncharacterized protein. (1014 aa)
	Dwilper	Period. (1067 aa)
	DwilGK13872	Uncharacterized protein. (428 aa)
	DwilGK22407	Uncharacterized protein. (651 aa)
	DwilGK13504	Uncharacterized protein. (1019 aa)

Your Current Organism:

Drosophila willistoni

NCBI taxonomy Id: 7260
Other names: D. willistoni

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DwilGK10105	DwilGK13504	B4NCU3	B4NIP3	Uncharacterized protein.	Uncharacterized protein.	0.837
DwilGK10105	DwilGK13872	B4NCU3	A0A0Q9X320	Uncharacterized protein.	Uncharacterized protein.	0.560
DwilGK10105	DwilGK20151	B4NCU3	B4MXG7	Uncharacterized protein.	Uncharacterized protein.	0.588
DwilGK10105	DwilGK22407	B4NCU3	B4NG65	Uncharacterized protein.	Uncharacterized protein.	0.547
DwilGK10105	Dwilper	B4NCU3	B4MSH4	Uncharacterized protein.	Period.	0.834
DwilGK11420	DwilGK13504	B4NA72	B4NIP3	Uncharacterized protein.	Uncharacterized protein.	0.992
DwilGK11420	DwilGK13872	B4NA72	A0A0Q9X320	Uncharacterized protein.	Uncharacterized protein.	0.964
DwilGK11420	DwilGK20151	B4NA72	B4MXG7	Uncharacterized protein.	Uncharacterized protein.	0.954
DwilGK11420	DwilGK22407	B4NA72	B4NG65	Uncharacterized protein.	Uncharacterized protein.	0.942
DwilGK11420	Dwilper	B4NA72	B4MSH4	Uncharacterized protein.	Period.	0.637
DwilGK13504	DwilGK10105	B4NIP3	B4NCU3	Uncharacterized protein.	Uncharacterized protein.	0.837
DwilGK13504	DwilGK11420	B4NIP3	B4NA72	Uncharacterized protein.	Uncharacterized protein.	0.992
DwilGK13872	DwilGK10105	A0A0Q9X320	B4NCU3	Uncharacterized protein.	Uncharacterized protein.	0.560
DwilGK13872	DwilGK11420	A0A0Q9X320	B4NA72	Uncharacterized protein.	Uncharacterized protein.	0.964
DwilGK20151	DwilGK10105	B4MXG7	B4NCU3	Uncharacterized protein.	Uncharacterized protein.	0.588
DwilGK20151	DwilGK11420	B4MXG7	B4NA72	Uncharacterized protein.	Uncharacterized protein.	0.954
DwilGK22407	DwilGK10105	B4NG65	B4NCU3	Uncharacterized protein.	Uncharacterized protein.	0.547
DwilGK22407	DwilGK11420	B4NG65	B4NA72	Uncharacterized protein.	Uncharacterized protein.	0.942
Dwilper	DwilGK10105	B4MSH4	B4NCU3	Period.	Uncharacterized protein.	0.834
Dwilper	DwilGK11420	B4MSH4	B4NA72	Period.	Uncharacterized protein.	0.637