STRINGSTRING
V4K871_EUTSA V4K871_EUTSA V4K8P7_EUTSA V4K8P7_EUTSA V4KC01_EUTSA V4KC01_EUTSA V4KDI4_EUTSA V4KDI4_EUTSA V4KDS2_EUTSA V4KDS2_EUTSA V4KE91_EUTSA V4KE91_EUTSA V4KES4_EUTSA V4KES4_EUTSA V4KG34_EUTSA V4KG34_EUTSA V4KIP5_EUTSA V4KIP5_EUTSA V4KJQ1_EUTSA V4KJQ1_EUTSA V4KKS4_EUTSA V4KKS4_EUTSA V4KLR2_EUTSA V4KLR2_EUTSA V4KMK5_EUTSA V4KMK5_EUTSA V4KML1_EUTSA V4KML1_EUTSA V4KP83_EUTSA V4KP83_EUTSA V4KR05_EUTSA V4KR05_EUTSA V4KR86_EUTSA V4KR86_EUTSA V4KRC1_EUTSA V4KRC1_EUTSA V4KRL1_EUTSA V4KRL1_EUTSA V4KT58_EUTSA V4KT58_EUTSA V4KWK2_EUTSA V4KWK2_EUTSA V4KWP0_EUTSA V4KWP0_EUTSA V4KWU3_EUTSA V4KWU3_EUTSA V4KY74_EUTSA V4KY74_EUTSA V4KZR7_EUTSA V4KZR7_EUTSA V4L0I7_EUTSA V4L0I7_EUTSA V4L1Q6_EUTSA V4L1Q6_EUTSA V4L1Y2_EUTSA V4L1Y2_EUTSA V4L2E4_EUTSA V4L2E4_EUTSA V4L2F4_EUTSA V4L2F4_EUTSA V4L316_EUTSA V4L316_EUTSA V4L3K9_EUTSA V4L3K9_EUTSA V4L9V5_EUTSA V4L9V5_EUTSA V4LA59_EUTSA V4LA59_EUTSA V4LAU3_EUTSA V4LAU3_EUTSA V4LCU2_EUTSA V4LCU2_EUTSA V4LEG2_EUTSA V4LEG2_EUTSA V4LFZ2_EUTSA V4LFZ2_EUTSA V4LG65_EUTSA V4LG65_EUTSA V4LHU1_EUTSA V4LHU1_EUTSA V4LKG4_EUTSA V4LKG4_EUTSA V4LL30_EUTSA V4LL30_EUTSA V4LL85_EUTSA V4LL85_EUTSA EIF6 EIF6 V4LPG2_EUTSA V4LPG2_EUTSA V4LQY8_EUTSA V4LQY8_EUTSA V4LRY1_EUTSA V4LRY1_EUTSA V4LSJ4_EUTSA V4LSJ4_EUTSA V4LTB1_EUTSA V4LTB1_EUTSA V4LVF5_EUTSA V4LVF5_EUTSA V4LWP2_EUTSA V4LWP2_EUTSA V4LX33_EUTSA V4LX33_EUTSA V4LY58_EUTSA V4LY58_EUTSA V4LYK0_EUTSA V4LYK0_EUTSA V4LYK4_EUTSA V4LYK4_EUTSA V4LZI8_EUTSA V4LZI8_EUTSA V4LZN1_EUTSA V4LZN1_EUTSA V4M0C7_EUTSA V4M0C7_EUTSA V4M4B5_EUTSA V4M4B5_EUTSA V4M4Z9_EUTSA V4M4Z9_EUTSA V4M6K9_EUTSA V4M6K9_EUTSA V4M9G0_EUTSA V4M9G0_EUTSA V4MBC8_EUTSA V4MBC8_EUTSA V4MD59_EUTSA V4MD59_EUTSA V4MFM9_EUTSA V4MFM9_EUTSA V4MGT2_EUTSA V4MGT2_EUTSA EIF6-2 EIF6-2 V4MJF6_EUTSA V4MJF6_EUTSA V4MKA8_EUTSA V4MKA8_EUTSA V4ML80_EUTSA V4ML80_EUTSA V4MYX0_EUTSA V4MYX0_EUTSA V4MZ91_EUTSA V4MZ91_EUTSA V4N4U0_EUTSA V4N4U0_EUTSA V4N570_EUTSA V4N570_EUTSA V4N7D6_EUTSA V4N7D6_EUTSA V4NB10_EUTSA V4NB10_EUTSA V4NKM6_EUTSA V4NKM6_EUTSA V4NQ57_EUTSA V4NQ57_EUTSA V4NZB1_EUTSA V4NZB1_EUTSA V4P5G2_EUTSA V4P5G2_EUTSA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
V4K871_EUTSAUncharacterized protein. (822 aa)
V4K8P7_EUTSADEAD-box ATP-dependent RNA helicase 29. (845 aa)
V4KC01_EUTSA60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family. (516 aa)
V4KDI4_EUTSAUncharacterized protein. (147 aa)
V4KDS2_EUTSACBF domain-containing protein. (1043 aa)
V4KE91_EUTSACP-type G domain-containing protein. (577 aa)
V4KES4_EUTSAUncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (594 aa)
V4KG34_EUTSANuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. (580 aa)
V4KIP5_EUTSAUncharacterized protein. (440 aa)
V4KJQ1_EUTSABrix domain-containing protein. (318 aa)
V4KKS4_EUTSAUncharacterized protein. (772 aa)
V4KLR2_EUTSAUncharacterized protein. (110 aa)
V4KMK5_EUTSAUncharacterized protein. (314 aa)
V4KML1_EUTSARibosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (774 aa)
V4KP83_EUTSABrix domain-containing protein. (348 aa)
V4KR05_EUTSARRM domain-containing protein. (223 aa)
V4KR86_EUTSARNA helicase. (604 aa)
V4KRC1_EUTSAUncharacterized protein. (429 aa)
V4KRL1_EUTSAUncharacterized protein. (260 aa)
V4KT58_EUTSAUncharacterized protein. (196 aa)
V4KWK2_EUTSAUncharacterized protein. (203 aa)
V4KWP0_EUTSAProtein MAK16 homolog; Belongs to the MAK16 family. (301 aa)
V4KWU3_EUTSANucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (655 aa)
V4KY74_EUTSARNA helicase. (742 aa)
V4KZR7_EUTSAProtein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (804 aa)
V4L0I7_EUTSACP-type G domain-containing protein. (591 aa)
V4L1Q6_EUTSAUncharacterized protein. (410 aa)
V4L1Y2_EUTSAUncharacterized protein. (256 aa)
V4L2E4_EUTSAOBG-type G domain-containing protein. (817 aa)
V4L2F4_EUTSAWD_REPEATS_REGION domain-containing protein. (441 aa)
V4L316_EUTSANOG1_N domain-containing protein. (133 aa)
V4L3K9_EUTSAUncharacterized protein. (500 aa)
V4L9V5_EUTSARNA helicase. (595 aa)
V4LA59_EUTSAUncharacterized protein. (194 aa)
V4LAU3_EUTSAUncharacterized protein. (491 aa)
V4LCU2_EUTSAUncharacterized protein. (375 aa)
V4LEG2_EUTSAUncharacterized protein. (535 aa)
V4LFZ2_EUTSAFtsJ domain-containing protein. (229 aa)
V4LG65_EUTSAPescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (591 aa)
V4LHU1_EUTSACP-type G domain-containing protein. (532 aa)
V4LKG4_EUTSAG domain-containing protein. (222 aa)
V4LL30_EUTSAUncharacterized protein. (191 aa)
V4LL85_EUTSAWD_REPEATS_REGION domain-containing protein. (472 aa)
EIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (245 aa)
V4LPG2_EUTSANUC153 domain-containing protein. (729 aa)
V4LQY8_EUTSAUncharacterized protein. (147 aa)
V4LRY1_EUTSADEAD-box ATP-dependent RNA helicase 29. (255 aa)
V4LSJ4_EUTSASAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (685 aa)
V4LTB1_EUTSAWD_REPEATS_REGION domain-containing protein. (484 aa)
V4LVF5_EUTSASAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (585 aa)
V4LWP2_EUTSAUncharacterized protein. (885 aa)
V4LX33_EUTSABrix domain-containing protein. (318 aa)
V4LY58_EUTSABrix domain-containing protein. (314 aa)
V4LYK0_EUTSAUncharacterized protein; Belongs to the DEAD box helicase family. (562 aa)
V4LYK4_EUTSAUncharacterized protein. (294 aa)
V4LZI8_EUTSAPeptidase_M24 domain-containing protein. (393 aa)
V4LZN1_EUTSACP-type G domain-containing protein. (591 aa)
V4M0C7_EUTSAPUM-HD domain-containing protein. (650 aa)
V4M4B5_EUTSAUncharacterized protein. (79 aa)
V4M4Z9_EUTSAUncharacterized protein. (115 aa)
V4M6K9_EUTSAUncharacterized protein. (776 aa)
V4M9G0_EUTSANOG1_N domain-containing protein. (238 aa)
V4MBC8_EUTSARibosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (316 aa)
V4MD59_EUTSAUncharacterized protein. (775 aa)
V4MFM9_EUTSAC2H2-type domain-containing protein. (402 aa)
V4MGT2_EUTSAUncharacterized protein; Belongs to the DEAD box helicase family. (793 aa)
EIF6-2Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (247 aa)
V4MJF6_EUTSAUncharacterized protein. (364 aa)
V4MKA8_EUTSA60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (187 aa)
V4ML80_EUTSAProtein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (793 aa)
V4MYX0_EUTSABrix domain-containing protein. (349 aa)
V4MZ91_EUTSACP-type G domain-containing protein. (371 aa)
V4N4U0_EUTSAUncharacterized protein. (355 aa)
V4N570_EUTSAUncharacterized protein. (105 aa)
V4N7D6_EUTSARibosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. (429 aa)
V4NB10_EUTSABrix domain-containing protein. (291 aa)
V4NKM6_EUTSAUncharacterized protein. (124 aa)
V4NQ57_EUTSASAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (524 aa)
V4NZB1_EUTSAC2H2-type domain-containing protein. (119 aa)
V4P5G2_EUTSAPutative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. (821 aa)
Your Current Organism:
Eutrema salsugineum
NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress
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