(44 nodes) Mixed, incl. GTP binding domain, and RNA pseudouridylate synthase network (Eutrema salsugineum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	V4JQQ4_EUTSA	Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (432 aa)
	V4K889_EUTSA	PseudoU_synth_2 domain-containing protein. (478 aa)
	V4K8F9_EUTSA	TrmE-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. (564 aa)
	V4KAB8_EUTSA	Uncharacterized protein. (603 aa)
	V4KBS2_EUTSA	Uncharacterized protein. (195 aa)
	V4KGQ3_EUTSA	Thioredoxin domain-containing protein. (484 aa)
	V4KMH3_EUTSA	Era-type G domain-containing protein. (429 aa)
	V4KT08_EUTSA	Uncharacterized protein. (101 aa)
	V4KTG7_EUTSA	Uncharacterized protein. (386 aa)
	V4KUL4_EUTSA	Uncharacterized protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Era GTPase family. (440 aa)
	V4KXT8_EUTSA	OBG-type G domain-containing protein. (498 aa)
	V4L9G9_EUTSA	Uncharacterized protein. (631 aa)
	V4LEC1_EUTSA	Uncharacterized protein. (664 aa)
	V4LFD7_EUTSA	EngB-type G domain-containing protein. (318 aa)
	V4LFR8_EUTSA	EngB-type G domain-containing protein. (477 aa)
	V4LI90_EUTSA	Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (391 aa)
	V4LIH9_EUTSA	Uncharacterized protein. (410 aa)
	V4LML4_EUTSA	SpoU_methylase domain-containing protein. (278 aa)
	V4LNX7_EUTSA	SpoU_methylase domain-containing protein. (353 aa)
	V4LPW8_EUTSA	Uncharacterized protein. (386 aa)
	V4LR11_EUTSA	Uncharacterized protein. (124 aa)
	V4LVS9_EUTSA	PseudoU_synth_2 domain-containing protein. (477 aa)
	V4LW01_EUTSA	Uncharacterized protein. (326 aa)
	V4LWS8_EUTSA	G domain-containing protein. (661 aa)
	V4LWZ9_EUTSA	PseudoU_synth_2 domain-containing protein. (475 aa)
	V4LZC9_EUTSA	PseudoU_synth_2 domain-containing protein. (382 aa)
	V4M2D4_EUTSA	Uncharacterized protein. (647 aa)
	V4M4J0_EUTSA	GIDA_assoc domain-containing protein. (730 aa)
	V4M5T3_EUTSA	SpoU_sub_bind domain-containing protein. (604 aa)
	V4M833_EUTSA	Uncharacterized protein. (386 aa)
	V4MAZ2_EUTSA	TRUD domain-containing protein. (692 aa)
	V4MEM9_EUTSA	PseudoU_synth_2 domain-containing protein. (333 aa)
	V4MG91_EUTSA	Uncharacterized protein. (488 aa)
	V4MI05_EUTSA	TP_methylase domain-containing protein. (346 aa)
	V4MJL3_EUTSA	DAO domain-containing protein. (432 aa)
	V4MJS5_EUTSA	G domain-containing protein. (377 aa)
	V4MKP0_EUTSA	SpoU_methylase domain-containing protein. (355 aa)
	V4MXQ7_EUTSA	Uncharacterized protein. (272 aa)
	V4N0H1_EUTSA	G domain-containing protein. (373 aa)
	V4N0J0_EUTSA	G domain-containing protein. (599 aa)
	V4N658_EUTSA	Uncharacterized protein. (193 aa)
	V4NHB6_EUTSA	Hflx-type G domain-containing protein. (580 aa)
	V4NIW4_EUTSA	EngB-type G domain-containing protein. (303 aa)
	V4P269_EUTSA	Uncharacterized protein. (632 aa)

Your Current Organism:

Eutrema salsugineum

NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
V4JQQ4_EUTSA	V4K8F9_EUTSA	V4JQQ4	V4K8F9	Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	TrmE-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.	0.631
V4JQQ4_EUTSA	V4KBS2_EUTSA	V4JQQ4	V4KBS2	Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	Uncharacterized protein.	0.838
V4JQQ4_EUTSA	V4KXT8_EUTSA	V4JQQ4	V4KXT8	Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	OBG-type G domain-containing protein.	0.445
V4JQQ4_EUTSA	V4L9G9_EUTSA	V4JQQ4	V4L9G9	Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	Uncharacterized protein.	0.631
V4JQQ4_EUTSA	V4LEC1_EUTSA	V4JQQ4	V4LEC1	Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	Uncharacterized protein.	0.631
V4JQQ4_EUTSA	V4LFD7_EUTSA	V4JQQ4	V4LFD7	Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	EngB-type G domain-containing protein.	0.565
V4JQQ4_EUTSA	V4LFR8_EUTSA	V4JQQ4	V4LFR8	Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	EngB-type G domain-containing protein.	0.565
V4JQQ4_EUTSA	V4LNX7_EUTSA	V4JQQ4	V4LNX7	Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	SpoU_methylase domain-containing protein.	0.538
V4JQQ4_EUTSA	V4M5T3_EUTSA	V4JQQ4	V4M5T3	Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	SpoU_sub_bind domain-containing protein.	0.538
V4JQQ4_EUTSA	V4MAZ2_EUTSA	V4JQQ4	V4MAZ2	Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	TRUD domain-containing protein.	0.805
V4JQQ4_EUTSA	V4MJS5_EUTSA	V4JQQ4	V4MJS5	Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	G domain-containing protein.	0.743
V4JQQ4_EUTSA	V4MKP0_EUTSA	V4JQQ4	V4MKP0	Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	SpoU_methylase domain-containing protein.	0.769
V4JQQ4_EUTSA	V4NIW4_EUTSA	V4JQQ4	V4NIW4	Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	EngB-type G domain-containing protein.	0.565
V4K889_EUTSA	V4K8F9_EUTSA	V4K889	V4K8F9	PseudoU_synth_2 domain-containing protein.	TrmE-type G domain-containing protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.	0.631
V4K889_EUTSA	V4KBS2_EUTSA	V4K889	V4KBS2	PseudoU_synth_2 domain-containing protein.	Uncharacterized protein.	0.838
V4K889_EUTSA	V4KXT8_EUTSA	V4K889	V4KXT8	PseudoU_synth_2 domain-containing protein.	OBG-type G domain-containing protein.	0.445
V4K889_EUTSA	V4L9G9_EUTSA	V4K889	V4L9G9	PseudoU_synth_2 domain-containing protein.	Uncharacterized protein.	0.631
V4K889_EUTSA	V4LEC1_EUTSA	V4K889	V4LEC1	PseudoU_synth_2 domain-containing protein.	Uncharacterized protein.	0.631
V4K889_EUTSA	V4LFD7_EUTSA	V4K889	V4LFD7	PseudoU_synth_2 domain-containing protein.	EngB-type G domain-containing protein.	0.565
V4K889_EUTSA	V4LFR8_EUTSA	V4K889	V4LFR8	PseudoU_synth_2 domain-containing protein.	EngB-type G domain-containing protein.	0.565

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