(73 nodes) Transcription factor, MADS-box, and Regulation of vegetative phase change network (Eutrema salsugineum)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	V4JVD3_EUTSA	MADS-box domain-containing protein. (306 aa)
	V4K9J1_EUTSA	MADS-box domain-containing protein. (145 aa)
	V4KB74_EUTSA	MADS-box domain-containing protein. (176 aa)
	V4KEN6_EUTSA	MADS-box domain-containing protein. (388 aa)
	V4KEU3_EUTSA	Uncharacterized protein. (258 aa)
	V4KI34_EUTSA	MADS-box domain-containing protein. (205 aa)
	V4KN16_EUTSA	MADS-box domain-containing protein. (331 aa)
	V4KN53_EUTSA	Uncharacterized protein. (199 aa)
	V4KPY2_EUTSA	MADS-box domain-containing protein. (305 aa)
	V4KQT9_EUTSA	Uncharacterized protein. (177 aa)
	V4KSI1_EUTSA	Uncharacterized protein. (270 aa)
	V4KTR3_EUTSA	MADS-box domain-containing protein. (240 aa)
	V4KU14_EUTSA	MADS-box domain-containing protein. (260 aa)
	V4KVF7_EUTSA	Uncharacterized protein. (231 aa)
	V4KWK8_EUTSA	Floricaula/leafy-like transcription factor; Probable transcription factor. Belongs to the FLO/LFY family. (417 aa)
	V4KZ10_EUTSA	Uncharacterized protein. (448 aa)
	V4KZF2_EUTSA	Uncharacterized protein. (202 aa)
	V4L2S2_EUTSA	TF-B3 domain-containing protein. (365 aa)
	V4L3E0_EUTSA	Uncharacterized protein. (250 aa)
	V4L404_EUTSA	Uncharacterized protein. (232 aa)
	V4L5G8_EUTSA	WD_REPEATS_REGION domain-containing protein. (317 aa)
	V4L729_EUTSA	Uncharacterized protein. (239 aa)
	V4LED8_EUTSA	Uncharacterized protein. (208 aa)
	V4LG50_EUTSA	MADS-box domain-containing protein. (318 aa)
	V4LGN9_EUTSA	Uncharacterized protein. (250 aa)
	V4LHF1_EUTSA	Uncharacterized protein. (213 aa)
	V4LIC4_EUTSA	FRIGIDA-like protein; Belongs to the Frigida family. (612 aa)
	V4LIP1_EUTSA	MADS-box domain-containing protein. (284 aa)
	V4LLZ6_EUTSA	MADS-box domain-containing protein. (211 aa)
	V4LM94_EUTSA	Uncharacterized protein. (197 aa)
	V4LND3_EUTSA	Uncharacterized protein. (241 aa)
	V4LP15_EUTSA	Uncharacterized protein. (354 aa)
	V4LP62_EUTSA	FRIGIDA-like protein; Belongs to the Frigida family. (457 aa)
	V4LPG5_EUTSA	Uncharacterized protein. (577 aa)
	V4LS25_EUTSA	Uncharacterized protein. (557 aa)
	V4LVK6_EUTSA	MADS-box domain-containing protein. (203 aa)
	V4LVT2_EUTSA	MADS-box domain-containing protein. (233 aa)
	V4LW03_EUTSA	Uncharacterized protein. (221 aa)
	V4LW47_EUTSA	MADS-box domain-containing protein. (386 aa)
	V4LX91_EUTSA	Glyco_trans_2-like domain-containing protein. (523 aa)
	V4LXP0_EUTSA	MADS-box domain-containing protein. (320 aa)
	V4LXZ7_EUTSA	MADS-box domain-containing protein. (244 aa)
	V4M179_EUTSA	Uncharacterized protein. (250 aa)
	V4M207_EUTSA	MADS-box domain-containing protein. (222 aa)
	V4M231_EUTSA	MADS-box domain-containing protein. (93 aa)
	V4M9V8_EUTSA	MADS-box domain-containing protein. (211 aa)
	V4MA98_EUTSA	MADS-box domain-containing protein. (175 aa)
	V4MAC2_EUTSA	MADS-box domain-containing protein. (184 aa)
	V4MDG7_EUTSA	MADS-box domain-containing protein. (103 aa)
	V4ME59_EUTSA	Uncharacterized protein. (217 aa)
	V4MFL6_EUTSA	MADS-box domain-containing protein. (117 aa)
	V4MG81_EUTSA	Uncharacterized protein. (292 aa)
	V4MHH5_EUTSA	Squamosa promoter-binding-like protein. (135 aa)
	V4MK96_EUTSA	Uncharacterized protein. (269 aa)
	V4MKU5_EUTSA	MADS-box domain-containing protein. (80 aa)
	V4ML36_EUTSA	MADS-box domain-containing protein. (251 aa)
	V4MQ01_EUTSA	BED-type domain-containing protein. (359 aa)
	V4MQB5_EUTSA	MADS-box domain-containing protein. (191 aa)
	V4MQT8_EUTSA	MADS-box domain-containing protein. (80 aa)
	V4MQZ0_EUTSA	Uncharacterized protein. (247 aa)
	V4MRZ1_EUTSA	MADS-box domain-containing protein. (162 aa)
	V4MXG7_EUTSA	Uncharacterized protein. (157 aa)
	V4N226_EUTSA	Uncharacterized protein. (254 aa)
	V4N9P7_EUTSA	MADS-box domain-containing protein. (294 aa)
	V4NBC6_EUTSA	RWP-RK domain-containing protein. (233 aa)
	V4NC98_EUTSA	MADS-box domain-containing protein. (148 aa)
	V4NDT4_EUTSA	Uncharacterized protein. (249 aa)
	V4NN87_EUTSA	Uncharacterized protein. (231 aa)
	V4NQI0_EUTSA	MADS-box domain-containing protein. (385 aa)
	V4NWU7_EUTSA	MADS-box domain-containing protein. (214 aa)
	V4NYI5_EUTSA	C3H1-type domain-containing protein. (581 aa)
	V4P152_EUTSA	Uncharacterized protein. (282 aa)
	V4P1R8_EUTSA	Uncharacterized protein. (234 aa)

Your Current Organism:

Eutrema salsugineum

NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
V4K9J1_EUTSA	V4M207_EUTSA	V4K9J1	V4M207	MADS-box domain-containing protein.	MADS-box domain-containing protein.	0.402
V4K9J1_EUTSA	V4MFL6_EUTSA	V4K9J1	V4MFL6	MADS-box domain-containing protein.	MADS-box domain-containing protein.	0.492
V4KB74_EUTSA	V4LVK6_EUTSA	V4KB74	V4LVK6	MADS-box domain-containing protein.	MADS-box domain-containing protein.	0.407
V4KB74_EUTSA	V4LVT2_EUTSA	V4KB74	V4LVT2	MADS-box domain-containing protein.	MADS-box domain-containing protein.	0.480
V4KB74_EUTSA	V4M207_EUTSA	V4KB74	V4M207	MADS-box domain-containing protein.	MADS-box domain-containing protein.	0.404
V4KB74_EUTSA	V4MDG7_EUTSA	V4KB74	V4MDG7	MADS-box domain-containing protein.	MADS-box domain-containing protein.	0.420
V4KB74_EUTSA	V4MFL6_EUTSA	V4KB74	V4MFL6	MADS-box domain-containing protein.	MADS-box domain-containing protein.	0.522
V4KB74_EUTSA	V4MQB5_EUTSA	V4KB74	V4MQB5	MADS-box domain-containing protein.	MADS-box domain-containing protein.	0.442
V4KB74_EUTSA	V4MRZ1_EUTSA	V4KB74	V4MRZ1	MADS-box domain-containing protein.	MADS-box domain-containing protein.	0.474
V4KB74_EUTSA	V4NC98_EUTSA	V4KB74	V4NC98	MADS-box domain-containing protein.	MADS-box domain-containing protein.	0.479
V4KB74_EUTSA	V4NQI0_EUTSA	V4KB74	V4NQI0	MADS-box domain-containing protein.	MADS-box domain-containing protein.	0.491
V4KEN6_EUTSA	V4LVT2_EUTSA	V4KEN6	V4LVT2	MADS-box domain-containing protein.	MADS-box domain-containing protein.	0.401
V4KEN6_EUTSA	V4MFL6_EUTSA	V4KEN6	V4MFL6	MADS-box domain-containing protein.	MADS-box domain-containing protein.	0.401
V4KEN6_EUTSA	V4MRZ1_EUTSA	V4KEN6	V4MRZ1	MADS-box domain-containing protein.	MADS-box domain-containing protein.	0.459
V4KEU3_EUTSA	V4KQT9_EUTSA	V4KEU3	V4KQT9	Uncharacterized protein.	Uncharacterized protein.	0.410
V4KEU3_EUTSA	V4KWK8_EUTSA	V4KEU3	V4KWK8	Uncharacterized protein.	Floricaula/leafy-like transcription factor; Probable transcription factor. Belongs to the FLO/LFY family.	0.627
V4KEU3_EUTSA	V4L729_EUTSA	V4KEU3	V4L729	Uncharacterized protein.	Uncharacterized protein.	0.485
V4KEU3_EUTSA	V4LHF1_EUTSA	V4KEU3	V4LHF1	Uncharacterized protein.	Uncharacterized protein.	0.473
V4KEU3_EUTSA	V4LP15_EUTSA	V4KEU3	V4LP15	Uncharacterized protein.	Uncharacterized protein.	0.424
V4KEU3_EUTSA	V4M179_EUTSA	V4KEU3	V4M179	Uncharacterized protein.	Uncharacterized protein.	0.407

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