(46 nodes) MADS MEF2-like, and Megasporocyte nucleus network (Eutrema salsugineum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	V4JVD3_EUTSA	MADS-box domain-containing protein. (306 aa)
	V4KEU3_EUTSA	Uncharacterized protein. (258 aa)
	V4KN53_EUTSA	Uncharacterized protein. (199 aa)
	V4KPY2_EUTSA	MADS-box domain-containing protein. (305 aa)
	V4KQT9_EUTSA	Uncharacterized protein. (177 aa)
	V4KSI1_EUTSA	Uncharacterized protein. (270 aa)
	V4KTR3_EUTSA	MADS-box domain-containing protein. (240 aa)
	V4KVF7_EUTSA	Uncharacterized protein. (231 aa)
	V4KWK8_EUTSA	Floricaula/leafy-like transcription factor; Probable transcription factor. Belongs to the FLO/LFY family. (417 aa)
	V4KZF2_EUTSA	Uncharacterized protein. (202 aa)
	V4L3E0_EUTSA	Uncharacterized protein. (250 aa)
	V4L404_EUTSA	Uncharacterized protein. (232 aa)
	V4L5G8_EUTSA	WD_REPEATS_REGION domain-containing protein. (317 aa)
	V4L729_EUTSA	Uncharacterized protein. (239 aa)
	V4LED8_EUTSA	Uncharacterized protein. (208 aa)
	V4LG50_EUTSA	MADS-box domain-containing protein. (318 aa)
	V4LGN9_EUTSA	Uncharacterized protein. (250 aa)
	V4LHF1_EUTSA	Uncharacterized protein. (213 aa)
	V4LIC4_EUTSA	FRIGIDA-like protein; Belongs to the Frigida family. (612 aa)
	V4LIP1_EUTSA	MADS-box domain-containing protein. (284 aa)
	V4LLZ6_EUTSA	MADS-box domain-containing protein. (211 aa)
	V4LM94_EUTSA	Uncharacterized protein. (197 aa)
	V4LP15_EUTSA	Uncharacterized protein. (354 aa)
	V4LP62_EUTSA	FRIGIDA-like protein; Belongs to the Frigida family. (457 aa)
	V4LVK6_EUTSA	MADS-box domain-containing protein. (203 aa)
	V4LW03_EUTSA	Uncharacterized protein. (221 aa)
	V4LXP0_EUTSA	MADS-box domain-containing protein. (320 aa)
	V4LXZ7_EUTSA	MADS-box domain-containing protein. (244 aa)
	V4M179_EUTSA	Uncharacterized protein. (250 aa)
	V4M9V8_EUTSA	MADS-box domain-containing protein. (211 aa)
	V4ME59_EUTSA	Uncharacterized protein. (217 aa)
	V4MG81_EUTSA	Uncharacterized protein. (292 aa)
	V4MHH5_EUTSA	Squamosa promoter-binding-like protein. (135 aa)
	V4MK96_EUTSA	Uncharacterized protein. (269 aa)
	V4ML36_EUTSA	MADS-box domain-containing protein. (251 aa)
	V4MQ01_EUTSA	BED-type domain-containing protein. (359 aa)
	V4MQT8_EUTSA	MADS-box domain-containing protein. (80 aa)
	V4MQZ0_EUTSA	Uncharacterized protein. (247 aa)
	V4MXG7_EUTSA	Uncharacterized protein. (157 aa)
	V4N226_EUTSA	Uncharacterized protein. (254 aa)
	V4NDT4_EUTSA	Uncharacterized protein. (249 aa)
	V4NN87_EUTSA	Uncharacterized protein. (231 aa)
	V4NWU7_EUTSA	MADS-box domain-containing protein. (214 aa)
	V4NYI5_EUTSA	C3H1-type domain-containing protein. (581 aa)
	V4P152_EUTSA	Uncharacterized protein. (282 aa)
	V4P1R8_EUTSA	Uncharacterized protein. (234 aa)

Your Current Organism:

Eutrema salsugineum

NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
V4KEU3_EUTSA	V4KQT9_EUTSA	V4KEU3	V4KQT9	Uncharacterized protein.	Uncharacterized protein.	0.410
V4KEU3_EUTSA	V4KWK8_EUTSA	V4KEU3	V4KWK8	Uncharacterized protein.	Floricaula/leafy-like transcription factor; Probable transcription factor. Belongs to the FLO/LFY family.	0.627
V4KEU3_EUTSA	V4L729_EUTSA	V4KEU3	V4L729	Uncharacterized protein.	Uncharacterized protein.	0.485
V4KEU3_EUTSA	V4LHF1_EUTSA	V4KEU3	V4LHF1	Uncharacterized protein.	Uncharacterized protein.	0.473
V4KEU3_EUTSA	V4LP15_EUTSA	V4KEU3	V4LP15	Uncharacterized protein.	Uncharacterized protein.	0.424
V4KEU3_EUTSA	V4M179_EUTSA	V4KEU3	V4M179	Uncharacterized protein.	Uncharacterized protein.	0.407
V4KEU3_EUTSA	V4MQZ0_EUTSA	V4KEU3	V4MQZ0	Uncharacterized protein.	Uncharacterized protein.	0.791
V4KEU3_EUTSA	V4MXG7_EUTSA	V4KEU3	V4MXG7	Uncharacterized protein.	Uncharacterized protein.	0.410
V4KN53_EUTSA	V4L5G8_EUTSA	V4KN53	V4L5G8	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.568
V4KN53_EUTSA	V4LIC4_EUTSA	V4KN53	V4LIC4	Uncharacterized protein.	FRIGIDA-like protein; Belongs to the Frigida family.	0.422
V4KN53_EUTSA	V4LXZ7_EUTSA	V4KN53	V4LXZ7	Uncharacterized protein.	MADS-box domain-containing protein.	0.513
V4KQT9_EUTSA	V4KEU3_EUTSA	V4KQT9	V4KEU3	Uncharacterized protein.	Uncharacterized protein.	0.410
V4KQT9_EUTSA	V4KWK8_EUTSA	V4KQT9	V4KWK8	Uncharacterized protein.	Floricaula/leafy-like transcription factor; Probable transcription factor. Belongs to the FLO/LFY family.	0.551
V4KQT9_EUTSA	V4L3E0_EUTSA	V4KQT9	V4L3E0	Uncharacterized protein.	Uncharacterized protein.	0.546
V4KQT9_EUTSA	V4L404_EUTSA	V4KQT9	V4L404	Uncharacterized protein.	Uncharacterized protein.	0.425
V4KQT9_EUTSA	V4L729_EUTSA	V4KQT9	V4L729	Uncharacterized protein.	Uncharacterized protein.	0.452
V4KQT9_EUTSA	V4LHF1_EUTSA	V4KQT9	V4LHF1	Uncharacterized protein.	Uncharacterized protein.	0.577
V4KQT9_EUTSA	V4LIC4_EUTSA	V4KQT9	V4LIC4	Uncharacterized protein.	FRIGIDA-like protein; Belongs to the Frigida family.	0.406
V4KQT9_EUTSA	V4MK96_EUTSA	V4KQT9	V4MK96	Uncharacterized protein.	Uncharacterized protein.	0.572
V4KSI1_EUTSA	V4KWK8_EUTSA	V4KSI1	V4KWK8	Uncharacterized protein.	Floricaula/leafy-like transcription factor; Probable transcription factor. Belongs to the FLO/LFY family.	0.547

page 1 of 9

Server load: low (18%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About