(17 nodes) Mixed, incl. Aspartyl protease, and PAR1 protein network (Eutrema salsugineum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	V4K1A1_EUTSA	RING-type E3 ubiquitin transferase. (560 aa)
	V4K5G8_EUTSA	Uncharacterized protein. (299 aa)
	V4KLN2_EUTSA	Uncharacterized protein. (361 aa)
	V4KPI4_EUTSA	Uncharacterized protein. (139 aa)
	V4KQW8_EUTSA	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (448 aa)
	V4L3A4_EUTSA	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (486 aa)
	V4L3B2_EUTSA	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (487 aa)
	V4LDX0_EUTSA	Abhydrolase_3 domain-containing protein. (334 aa)
	V4LHR7_EUTSA	Uncharacterized protein. (195 aa)
	V4LLT1_EUTSA	Trehalose 6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. (383 aa)
	V4M2G1_EUTSA	GGACT domain-containing protein. (155 aa)
	V4MAX9_EUTSA	RING-type E3 ubiquitin transferase. (832 aa)
	V4MJV2_EUTSA	Uncharacterized protein. (587 aa)
	V4MK55_EUTSA	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (524 aa)
	V4MMP6_EUTSA	Uncharacterized protein. (300 aa)
	V4ND09_EUTSA	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (484 aa)
	V4P0V5_EUTSA	Remorin_C domain-containing protein. (272 aa)

Your Current Organism:

Eutrema salsugineum

NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
V4K1A1_EUTSA	V4MAX9_EUTSA	V4K1A1	V4MAX9	RING-type E3 ubiquitin transferase.	RING-type E3 ubiquitin transferase.	0.561
V4K5G8_EUTSA	V4KLN2_EUTSA	V4K5G8	V4KLN2	Uncharacterized protein.	Uncharacterized protein.	0.591
V4K5G8_EUTSA	V4KPI4_EUTSA	V4K5G8	V4KPI4	Uncharacterized protein.	Uncharacterized protein.	0.583
V4K5G8_EUTSA	V4KQW8_EUTSA	V4K5G8	V4KQW8	Uncharacterized protein.	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.	0.495
V4K5G8_EUTSA	V4L3A4_EUTSA	V4K5G8	V4L3A4	Uncharacterized protein.	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.	0.420
V4K5G8_EUTSA	V4L3B2_EUTSA	V4K5G8	V4L3B2	Uncharacterized protein.	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.	0.426
V4K5G8_EUTSA	V4LHR7_EUTSA	V4K5G8	V4LHR7	Uncharacterized protein.	Uncharacterized protein.	0.579
V4K5G8_EUTSA	V4MAX9_EUTSA	V4K5G8	V4MAX9	Uncharacterized protein.	RING-type E3 ubiquitin transferase.	0.548
V4K5G8_EUTSA	V4MJV2_EUTSA	V4K5G8	V4MJV2	Uncharacterized protein.	Uncharacterized protein.	0.585
V4K5G8_EUTSA	V4MK55_EUTSA	V4K5G8	V4MK55	Uncharacterized protein.	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.	0.450
V4K5G8_EUTSA	V4ND09_EUTSA	V4K5G8	V4ND09	Uncharacterized protein.	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.	0.424
V4K5G8_EUTSA	V4P0V5_EUTSA	V4K5G8	V4P0V5	Uncharacterized protein.	Remorin_C domain-containing protein.	0.561
V4KLN2_EUTSA	V4K5G8_EUTSA	V4KLN2	V4K5G8	Uncharacterized protein.	Uncharacterized protein.	0.591
V4KLN2_EUTSA	V4KPI4_EUTSA	V4KLN2	V4KPI4	Uncharacterized protein.	Uncharacterized protein.	0.578
V4KLN2_EUTSA	V4KQW8_EUTSA	V4KLN2	V4KQW8	Uncharacterized protein.	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.	0.420
V4KLN2_EUTSA	V4LHR7_EUTSA	V4KLN2	V4LHR7	Uncharacterized protein.	Uncharacterized protein.	0.618
V4KLN2_EUTSA	V4MAX9_EUTSA	V4KLN2	V4MAX9	Uncharacterized protein.	RING-type E3 ubiquitin transferase.	0.547
V4KLN2_EUTSA	V4MJV2_EUTSA	V4KLN2	V4MJV2	Uncharacterized protein.	Uncharacterized protein.	0.583
V4KLN2_EUTSA	V4MMP6_EUTSA	V4KLN2	V4MMP6	Uncharacterized protein.	Uncharacterized protein.	0.591
V4KLN2_EUTSA	V4P0V5_EUTSA	V4KLN2	V4P0V5	Uncharacterized protein.	Remorin_C domain-containing protein.	0.547

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