(50 nodes) Mixed, incl. Multicopper oxidase, and Heavy-metal-associated domain network (Eutrema salsugineum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	V4JPE9_EUTSA	RING-type domain-containing protein. (329 aa)
	V4K649_EUTSA	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (467 aa)
	V4K664_EUTSA	Phytocyanin domain-containing protein. (129 aa)
	V4KHI9_EUTSA	Uncharacterized protein. (128 aa)
	V4KJX9_EUTSA	Uncharacterized protein. (546 aa)
	V4KML0_EUTSA	Uncharacterized protein. (544 aa)
	V4KQR8_EUTSA	Uncharacterized protein; Belongs to the peptidase S10 family. (465 aa)
	V4KSN9_EUTSA	Annexin. (317 aa)
	V4KVB6_EUTSA	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (391 aa)
	V4KXG2_EUTSA	Uncharacterized protein. (524 aa)
	V4KYE2_EUTSA	Laccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family. (583 aa)
	V4L034_EUTSA	Uncharacterized protein. (539 aa)
	V4L0B3_EUTSA	Uncharacterized protein. (201 aa)
	V4L271_EUTSA	HMA domain-containing protein. (153 aa)
	V4L4D3_EUTSA	Uncharacterized protein. (545 aa)
	V4L8R6_EUTSA	EGF_CA domain-containing protein. (627 aa)
	V4LA19_EUTSA	HMA domain-containing protein. (245 aa)
	V4LB16_EUTSA	Laccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family. (572 aa)
	V4LB28_EUTSA	Uncharacterized protein. (1012 aa)
	V4LBP0_EUTSA	HMA domain-containing protein. (142 aa)
	V4LFA6_EUTSA	Laccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family. (570 aa)
	V4LFK3_EUTSA	Laccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family. (512 aa)
	V4LG42_EUTSA	HMA domain-containing protein. (150 aa)
	V4LH17_EUTSA	Uncharacterized protein. (418 aa)
	V4LJV4_EUTSA	DsbD_2 domain-containing protein. (378 aa)
	V4LJZ2_EUTSA	Laccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family. (588 aa)
	V4LKV1_EUTSA	HMA domain-containing protein. (77 aa)
	V4LL60_EUTSA	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (401 aa)
	V4LT56_EUTSA	Uncharacterized protein. (932 aa)
	V4LYS8_EUTSA	HMA domain-containing protein. (76 aa)
	V4LYW9_EUTSA	HMA domain-containing protein. (134 aa)
	V4M218_EUTSA	Uncharacterized protein. (812 aa)
	V4M8F5_EUTSA	HMA domain-containing protein. (267 aa)
	V4MB62_EUTSA	DsbD_2 domain-containing protein. (378 aa)
	V4MCP7_EUTSA	Uncharacterized protein. (97 aa)
	V4MCV1_EUTSA	Uncharacterized protein. (994 aa)
	V4MDD7_EUTSA	HMA domain-containing protein. (158 aa)
	V4ME76_EUTSA	Uncharacterized protein. (596 aa)
	V4MFA3_EUTSA	Uncharacterized protein. (541 aa)
	V4MFH6_EUTSA	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (287 aa)
	V4MFK7_EUTSA	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (194 aa)
	V4N442_EUTSA	Laccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family. (570 aa)
	V4N4P8_EUTSA	HMA domain-containing protein. (84 aa)
	V4N5A6_EUTSA	Uncharacterized protein; Belongs to the multicopper oxidase family. (399 aa)
	V4N8R0_EUTSA	Uncharacterized protein. (143 aa)
	V4N8V4_EUTSA	HMA domain-containing protein. (886 aa)
	V4NQ62_EUTSA	Uncharacterized protein. (224 aa)
	V4NWQ3_EUTSA	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family. (401 aa)
	V4P1Y2_EUTSA	Uncharacterized protein. (822 aa)
	V4P215_EUTSA	Uncharacterized protein. (541 aa)

Your Current Organism:

Eutrema salsugineum

NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
V4K649_EUTSA	V4KML0_EUTSA	V4K649	V4KML0	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.	Uncharacterized protein.	0.590
V4K649_EUTSA	V4MFA3_EUTSA	V4K649	V4MFA3	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.	Uncharacterized protein.	0.585
V4K649_EUTSA	V4P215_EUTSA	V4K649	V4P215	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.	Uncharacterized protein.	0.564
V4K664_EUTSA	V4KYE2_EUTSA	V4K664	V4KYE2	Phytocyanin domain-containing protein.	Laccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family.	0.545
V4K664_EUTSA	V4LB16_EUTSA	V4K664	V4LB16	Phytocyanin domain-containing protein.	Laccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family.	0.545
V4K664_EUTSA	V4LFA6_EUTSA	V4K664	V4LFA6	Phytocyanin domain-containing protein.	Laccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family.	0.547
V4K664_EUTSA	V4LFK3_EUTSA	V4K664	V4LFK3	Phytocyanin domain-containing protein.	Laccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family.	0.545
V4K664_EUTSA	V4N5A6_EUTSA	V4K664	V4N5A6	Phytocyanin domain-containing protein.	Uncharacterized protein; Belongs to the multicopper oxidase family.	0.548
V4KML0_EUTSA	V4K649_EUTSA	V4KML0	V4K649	Uncharacterized protein.	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.	0.590
V4KML0_EUTSA	V4L0B3_EUTSA	V4KML0	V4L0B3	Uncharacterized protein.	Uncharacterized protein.	0.448
V4KSN9_EUTSA	V4LJV4_EUTSA	V4KSN9	V4LJV4	Annexin.	DsbD_2 domain-containing protein.	0.459
V4KSN9_EUTSA	V4MB62_EUTSA	V4KSN9	V4MB62	Annexin.	DsbD_2 domain-containing protein.	0.545
V4KVB6_EUTSA	V4P215_EUTSA	V4KVB6	V4P215	Peptidase A1 domain-containing protein; Belongs to the peptidase A1 family.	Uncharacterized protein.	0.518
V4KYE2_EUTSA	V4K664_EUTSA	V4KYE2	V4K664	Laccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family.	Phytocyanin domain-containing protein.	0.545
V4L034_EUTSA	V4L0B3_EUTSA	V4L034	V4L0B3	Uncharacterized protein.	Uncharacterized protein.	0.452
V4L0B3_EUTSA	V4KML0_EUTSA	V4L0B3	V4KML0	Uncharacterized protein.	Uncharacterized protein.	0.448
V4L0B3_EUTSA	V4L034_EUTSA	V4L0B3	V4L034	Uncharacterized protein.	Uncharacterized protein.	0.452
V4L0B3_EUTSA	V4ME76_EUTSA	V4L0B3	V4ME76	Uncharacterized protein.	Uncharacterized protein.	0.441
V4L0B3_EUTSA	V4N5A6_EUTSA	V4L0B3	V4N5A6	Uncharacterized protein.	Uncharacterized protein; Belongs to the multicopper oxidase family.	0.400
V4LA19_EUTSA	V4M8F5_EUTSA	V4LA19	V4M8F5	HMA domain-containing protein.	HMA domain-containing protein.	0.427

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