(17 nodes) Mixed, incl. S27a-like superfamily, and Heat shock chaperonin-binding network (Eutrema salsugineum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	V4K827_EUTSA	Uncharacterized protein. (403 aa)
	V4KQR7_EUTSA	TGc domain-containing protein. (732 aa)
	V4KRQ6_EUTSA	Uncharacterized protein. (228 aa)
	V4KV39_EUTSA	Uncharacterized protein. (367 aa)
	V4KX52_EUTSA	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (581 aa)
	V4L0J2_EUTSA	Uncharacterized protein. (349 aa)
	V4L3U7_EUTSA	Ubiquitin-like domain-containing protein. (156 aa)
	V4L4B2_EUTSA	Uncharacterized protein. (379 aa)
	V4LCW7_EUTSA	U-box domain-containing protein. (1036 aa)
	V4LDA9_EUTSA	Uncharacterized protein. (845 aa)
	V4LVC5_EUTSA	Ubiquitin-like domain-containing protein. (157 aa)
	V4M082_EUTSA	Uncharacterized protein; Belongs to the peptidase C19 family. (1071 aa)
	V4M6Y5_EUTSA	Uncharacterized protein. (567 aa)
	V4M8W6_EUTSA	TRAF-type domain-containing protein. (561 aa)
	V4N2E1_EUTSA	Ubiquitin-like domain-containing protein. (157 aa)
	V4N6R1_EUTSA	Uncharacterized protein. (1624 aa)
	V4P2K4_EUTSA	Uncharacterized protein. (558 aa)

Your Current Organism:

Eutrema salsugineum

NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
V4K827_EUTSA	V4KQR7_EUTSA	V4K827	V4KQR7	Uncharacterized protein.	TGc domain-containing protein.	0.961
V4K827_EUTSA	V4KRQ6_EUTSA	V4K827	V4KRQ6	Uncharacterized protein.	Uncharacterized protein.	0.449
V4K827_EUTSA	V4KX52_EUTSA	V4K827	V4KX52	Uncharacterized protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.449
V4K827_EUTSA	V4L0J2_EUTSA	V4K827	V4L0J2	Uncharacterized protein.	Uncharacterized protein.	0.867
V4K827_EUTSA	V4L3U7_EUTSA	V4K827	V4L3U7	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.746
V4K827_EUTSA	V4L4B2_EUTSA	V4K827	V4L4B2	Uncharacterized protein.	Uncharacterized protein.	0.867
V4K827_EUTSA	V4LCW7_EUTSA	V4K827	V4LCW7	Uncharacterized protein.	U-box domain-containing protein.	0.912
V4K827_EUTSA	V4LDA9_EUTSA	V4K827	V4LDA9	Uncharacterized protein.	Uncharacterized protein.	0.457
V4K827_EUTSA	V4LVC5_EUTSA	V4K827	V4LVC5	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.746
V4K827_EUTSA	V4M082_EUTSA	V4K827	V4M082	Uncharacterized protein.	Uncharacterized protein; Belongs to the peptidase C19 family.	0.562
V4K827_EUTSA	V4M6Y5_EUTSA	V4K827	V4M6Y5	Uncharacterized protein.	Uncharacterized protein.	0.719
V4K827_EUTSA	V4M8W6_EUTSA	V4K827	V4M8W6	Uncharacterized protein.	TRAF-type domain-containing protein.	0.457
V4K827_EUTSA	V4N2E1_EUTSA	V4K827	V4N2E1	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.746
V4K827_EUTSA	V4N6R1_EUTSA	V4K827	V4N6R1	Uncharacterized protein.	Uncharacterized protein.	0.723
V4K827_EUTSA	V4P2K4_EUTSA	V4K827	V4P2K4	Uncharacterized protein.	Uncharacterized protein.	0.719
V4KQR7_EUTSA	V4K827_EUTSA	V4KQR7	V4K827	TGc domain-containing protein.	Uncharacterized protein.	0.961
V4KQR7_EUTSA	V4KRQ6_EUTSA	V4KQR7	V4KRQ6	TGc domain-containing protein.	Uncharacterized protein.	0.706
V4KQR7_EUTSA	V4KV39_EUTSA	V4KQR7	V4KV39	TGc domain-containing protein.	Uncharacterized protein.	0.961
V4KQR7_EUTSA	V4KX52_EUTSA	V4KQR7	V4KX52	TGc domain-containing protein.	Uncharacterized protein; Belongs to the PI3/PI4-kinase family.	0.706
V4KQR7_EUTSA	V4L3U7_EUTSA	V4KQR7	V4L3U7	TGc domain-containing protein.	Ubiquitin-like domain-containing protein.	0.796

page 1 of 12

Server load: very high (>100%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About