(17 nodes) Anaphase-promoting complex-dependent catabolic process network (Eutrema salsugineum)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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Your Input:
	V4K3V9_EUTSA	RING-type domain-containing protein. (77 aa)
	V4KSS6_EUTSA	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (242 aa)
	V4L1V3_EUTSA	ANAPC5 domain-containing protein. (909 aa)
	V4L3Q4_EUTSA	WD_REPEATS_REGION domain-containing protein. (474 aa)
	V4LDI1_EUTSA	APC1_C domain-containing protein. (1731 aa)
	V4LJC1_EUTSA	Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle. (192 aa)
	V4LKR6_EUTSA	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (255 aa)
	V4LNB4_EUTSA	WD_REPEATS_REGION domain-containing protein. (481 aa)
	V4LWP3_EUTSA	WD_REPEATS_REGION domain-containing protein. (474 aa)
	V4M449_EUTSA	CULLIN_2 domain-containing protein; Belongs to the cullin family. (860 aa)
	V4M7Y6_EUTSA	TPR_REGION domain-containing protein. (544 aa)
	V4MBC2_EUTSA	GLTSCR1 domain-containing protein. (378 aa)
	V4MQ60_EUTSA	WD_REPEATS_REGION domain-containing protein. (773 aa)
	V4N4P2_EUTSA	APC1_C domain-containing protein. (216 aa)
	V4NHR4_EUTSA	TPR_REGION domain-containing protein. (579 aa)
	V4NN33_EUTSA	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (181 aa)
	V4P032_EUTSA	Uncharacterized protein. (530 aa)

Your Current Organism:

Eutrema salsugineum

NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
V4K3V9_EUTSA	V4KSS6_EUTSA	V4K3V9	V4KSS6	RING-type domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.983
V4K3V9_EUTSA	V4L1V3_EUTSA	V4K3V9	V4L1V3	RING-type domain-containing protein.	ANAPC5 domain-containing protein.	0.998
V4K3V9_EUTSA	V4L3Q4_EUTSA	V4K3V9	V4L3Q4	RING-type domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.923
V4K3V9_EUTSA	V4LDI1_EUTSA	V4K3V9	V4LDI1	RING-type domain-containing protein.	APC1_C domain-containing protein.	0.989
V4K3V9_EUTSA	V4LJC1_EUTSA	V4K3V9	V4LJC1	RING-type domain-containing protein.	Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.	0.998
V4K3V9_EUTSA	V4LKR6_EUTSA	V4K3V9	V4LKR6	RING-type domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.992
V4K3V9_EUTSA	V4LNB4_EUTSA	V4K3V9	V4LNB4	RING-type domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.911
V4K3V9_EUTSA	V4LWP3_EUTSA	V4K3V9	V4LWP3	RING-type domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.883
V4K3V9_EUTSA	V4M449_EUTSA	V4K3V9	V4M449	RING-type domain-containing protein.	CULLIN_2 domain-containing protein; Belongs to the cullin family.	0.997
V4K3V9_EUTSA	V4M7Y6_EUTSA	V4K3V9	V4M7Y6	RING-type domain-containing protein.	TPR_REGION domain-containing protein.	0.997
V4K3V9_EUTSA	V4MBC2_EUTSA	V4K3V9	V4MBC2	RING-type domain-containing protein.	GLTSCR1 domain-containing protein.	0.982
V4K3V9_EUTSA	V4MQ60_EUTSA	V4K3V9	V4MQ60	RING-type domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.998
V4K3V9_EUTSA	V4N4P2_EUTSA	V4K3V9	V4N4P2	RING-type domain-containing protein.	APC1_C domain-containing protein.	0.989
V4K3V9_EUTSA	V4NHR4_EUTSA	V4K3V9	V4NHR4	RING-type domain-containing protein.	TPR_REGION domain-containing protein.	0.989
V4K3V9_EUTSA	V4NN33_EUTSA	V4K3V9	V4NN33	RING-type domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.983
V4K3V9_EUTSA	V4P032_EUTSA	V4K3V9	V4P032	RING-type domain-containing protein.	Uncharacterized protein.	0.980
V4KSS6_EUTSA	V4K3V9_EUTSA	V4KSS6	V4K3V9	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	RING-type domain-containing protein.	0.983
V4KSS6_EUTSA	V4L1V3_EUTSA	V4KSS6	V4L1V3	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	ANAPC5 domain-containing protein.	0.964
V4KSS6_EUTSA	V4L3Q4_EUTSA	V4KSS6	V4L3Q4	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	WD_REPEATS_REGION domain-containing protein.	0.861
V4KSS6_EUTSA	V4LDI1_EUTSA	V4KSS6	V4LDI1	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	APC1_C domain-containing protein.	0.836

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