(10 nodes) Structural constituent of nuclear pore network (Eutrema salsugineum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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Others

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co-expression

protein homology

Your Input:
	V4K928_EUTSA	Nup54 domain-containing protein. (304 aa)
	V4KIH4_EUTSA	Uncharacterized protein. (1834 aa)
	V4KKX6_EUTSA	Uncharacterized protein. (1443 aa)
	V4KZ49_EUTSA	Nucleoporin_N domain-containing protein. (1456 aa)
	V4L124_EUTSA	DUF5311 domain-containing protein. (1507 aa)
	V4LKR7_EUTSA	Nuclear pore protein. (639 aa)
	V4LWV9_EUTSA	Uncharacterized protein. (448 aa)
	V4M956_EUTSA	Nuclear pore protein. (861 aa)
	V4MKC8_EUTSA	Uncharacterized protein. (1964 aa)
	V4NP39_EUTSA	Nuclear pore complex protein NUP35. (335 aa)

Your Current Organism:

Eutrema salsugineum

NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
V4K928_EUTSA	V4KIH4_EUTSA	V4K928	V4KIH4	Nup54 domain-containing protein.	Uncharacterized protein.	0.995
V4K928_EUTSA	V4KKX6_EUTSA	V4K928	V4KKX6	Nup54 domain-containing protein.	Uncharacterized protein.	0.991
V4K928_EUTSA	V4KZ49_EUTSA	V4K928	V4KZ49	Nup54 domain-containing protein.	Nucleoporin_N domain-containing protein.	0.995
V4K928_EUTSA	V4L124_EUTSA	V4K928	V4L124	Nup54 domain-containing protein.	DUF5311 domain-containing protein.	0.982
V4K928_EUTSA	V4LKR7_EUTSA	V4K928	V4LKR7	Nup54 domain-containing protein.	Nuclear pore protein.	0.991
V4K928_EUTSA	V4LWV9_EUTSA	V4K928	V4LWV9	Nup54 domain-containing protein.	Uncharacterized protein.	0.991
V4K928_EUTSA	V4M956_EUTSA	V4K928	V4M956	Nup54 domain-containing protein.	Nuclear pore protein.	0.991
V4K928_EUTSA	V4MKC8_EUTSA	V4K928	V4MKC8	Nup54 domain-containing protein.	Uncharacterized protein.	0.994
V4K928_EUTSA	V4NP39_EUTSA	V4K928	V4NP39	Nup54 domain-containing protein.	Nuclear pore complex protein NUP35.	0.989
V4KIH4_EUTSA	V4K928_EUTSA	V4KIH4	V4K928	Uncharacterized protein.	Nup54 domain-containing protein.	0.995
V4KIH4_EUTSA	V4KKX6_EUTSA	V4KIH4	V4KKX6	Uncharacterized protein.	Uncharacterized protein.	0.994
V4KIH4_EUTSA	V4KZ49_EUTSA	V4KIH4	V4KZ49	Uncharacterized protein.	Nucleoporin_N domain-containing protein.	0.999
V4KIH4_EUTSA	V4L124_EUTSA	V4KIH4	V4L124	Uncharacterized protein.	DUF5311 domain-containing protein.	0.999
V4KIH4_EUTSA	V4LKR7_EUTSA	V4KIH4	V4LKR7	Uncharacterized protein.	Nuclear pore protein.	0.999
V4KIH4_EUTSA	V4LWV9_EUTSA	V4KIH4	V4LWV9	Uncharacterized protein.	Uncharacterized protein.	0.992
V4KIH4_EUTSA	V4M956_EUTSA	V4KIH4	V4M956	Uncharacterized protein.	Nuclear pore protein.	0.999
V4KIH4_EUTSA	V4MKC8_EUTSA	V4KIH4	V4MKC8	Uncharacterized protein.	Uncharacterized protein.	0.997
V4KIH4_EUTSA	V4NP39_EUTSA	V4KIH4	V4NP39	Uncharacterized protein.	Nuclear pore complex protein NUP35.	0.994
V4KKX6_EUTSA	V4K928_EUTSA	V4KKX6	V4K928	Uncharacterized protein.	Nup54 domain-containing protein.	0.991
V4KKX6_EUTSA	V4KIH4_EUTSA	V4KKX6	V4KIH4	Uncharacterized protein.	Uncharacterized protein.	0.994

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