(48 nodes) Regulation of cell morphogenesis involved in differentiation network (Eutrema salsugineum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	V4M1V6_EUTSA	Uncharacterized protein. (222 aa)
	V4JRP8_EUTSA	Uncharacterized protein. (227 aa)
	V4JSX7_EUTSA	VQ domain-containing protein. (144 aa)
	V4K9J1_EUTSA	MADS-box domain-containing protein. (145 aa)
	V4KCE1_EUTSA	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (275 aa)
	V4KE57_EUTSA	Uncharacterized protein. (579 aa)
	V4KH70_EUTSA	Uncharacterized protein. (922 aa)
	V4KIE9_EUTSA	PRONE domain-containing protein. (507 aa)
	V4KJ30_EUTSA	Uncharacterized protein. (553 aa)
	V4KJ82_EUTSA	MADS-box domain-containing protein. (327 aa)
	V4KLZ1_EUTSA	Uncharacterized protein; Belongs to the protein kinase superfamily. (497 aa)
	V4KRB1_EUTSA	Uncharacterized protein. (549 aa)
	V4KRP3_EUTSA	Uncharacterized protein. (219 aa)
	V4KSR2_EUTSA	MADS-box domain-containing protein. (377 aa)
	V4KUG0_EUTSA	Uncharacterized protein. (892 aa)
	V4KY08_EUTSA	MADS-box domain-containing protein. (375 aa)
	V4L3C2_EUTSA	2-Hacid_dh_C domain-containing protein. (631 aa)
	V4L3K7_EUTSA	Protein kinase domain-containing protein. (656 aa)
	V4L4A8_EUTSA	Uncharacterized protein. (238 aa)
	V4L5N4_EUTSA	Protein kinase domain-containing protein. (635 aa)
	V4LBN9_EUTSA	Protein kinase domain-containing protein. (677 aa)
	V4LDZ6_EUTSA	Uncharacterized protein. (551 aa)
	V4LE03_EUTSA	Uncharacterized protein. (527 aa)
	V4LFJ4_EUTSA	Uncharacterized protein. (528 aa)
	V4LI10_EUTSA	NAC domain-containing protein. (328 aa)
	V4LIF3_EUTSA	Protein kinase domain-containing protein. (951 aa)
	V4LNP6_EUTSA	PRONE domain-containing protein. (497 aa)
	V4LQK6_EUTSA	Protein kinase domain-containing protein. (878 aa)
	V4LST9_EUTSA	Uncharacterized protein. (602 aa)
	V4NYG2_EUTSA	Uncharacterized protein. (110 aa)
	V4M6W7_EUTSA	VQ domain-containing protein. (285 aa)
	V4M8F0_EUTSA	Uncharacterized protein. (98 aa)
	V4M9P2_EUTSA	Uncharacterized protein. (492 aa)
	V4MAR1_EUTSA	Uncharacterized protein. (125 aa)
	V4MD84_EUTSA	Uncharacterized protein. (111 aa)
	V4MGF9_EUTSA	Protein kinase domain-containing protein. (684 aa)
	V4MGQ3_EUTSA	Uncharacterized protein. (581 aa)
	V4MKA1_EUTSA	PRONE domain-containing protein. (543 aa)
	V4MKG1_EUTSA	Protein kinase domain-containing protein. (881 aa)
	V4MNE3_EUTSA	Uncharacterized protein. (159 aa)
	V4MNQ3_EUTSA	Uncharacterized protein. (406 aa)
	V4MQR7_EUTSA	Uncharacterized protein. (110 aa)
	V4N6N4_EUTSA	Exocyst subunit Exo70 family protein; Component of the exocyst complex. (658 aa)
	V4N6V2_EUTSA	Exocyst subunit Exo70 family protein; Component of the exocyst complex. (697 aa)
	V4NQ38_EUTSA	Uncharacterized protein. (554 aa)
	V4NRM7_EUTSA	FKS1_dom1 domain-containing protein. (1904 aa)
	V4NTW0_EUTSA	NAC domain-containing protein. (356 aa)
	V4NWB2_EUTSA	FKS1_dom1 domain-containing protein. (1910 aa)

Your Current Organism:

Eutrema salsugineum

NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
V4KIE9_EUTSA	V4L3K7_EUTSA	V4KIE9	V4L3K7	PRONE domain-containing protein.	Protein kinase domain-containing protein.	0.648
V4KIE9_EUTSA	V4M1V6_EUTSA	V4KIE9	V4M1V6	PRONE domain-containing protein.	Uncharacterized protein.	0.565
V4KIE9_EUTSA	V4MGF9_EUTSA	V4KIE9	V4MGF9	PRONE domain-containing protein.	Protein kinase domain-containing protein.	0.576
V4KSR2_EUTSA	V4LST9_EUTSA	V4KSR2	V4LST9	MADS-box domain-containing protein.	Uncharacterized protein.	0.422
V4KSR2_EUTSA	V4MNQ3_EUTSA	V4KSR2	V4MNQ3	MADS-box domain-containing protein.	Uncharacterized protein.	0.438
V4L3K7_EUTSA	V4KIE9_EUTSA	V4L3K7	V4KIE9	Protein kinase domain-containing protein.	PRONE domain-containing protein.	0.648
V4L3K7_EUTSA	V4MKA1_EUTSA	V4L3K7	V4MKA1	Protein kinase domain-containing protein.	PRONE domain-containing protein.	0.605
V4LE03_EUTSA	V4MGQ3_EUTSA	V4LE03	V4MGQ3	Uncharacterized protein.	Uncharacterized protein.	0.459
V4LFJ4_EUTSA	V4MGQ3_EUTSA	V4LFJ4	V4MGQ3	Uncharacterized protein.	Uncharacterized protein.	0.459
V4LQK6_EUTSA	V4MNE3_EUTSA	V4LQK6	V4MNE3	Protein kinase domain-containing protein.	Uncharacterized protein.	0.563
V4LQK6_EUTSA	V4MQR7_EUTSA	V4LQK6	V4MQR7	Protein kinase domain-containing protein.	Uncharacterized protein.	0.557
V4LQK6_EUTSA	V4NYG2_EUTSA	V4LQK6	V4NYG2	Protein kinase domain-containing protein.	Uncharacterized protein.	0.564
V4LST9_EUTSA	V4KSR2_EUTSA	V4LST9	V4KSR2	Uncharacterized protein.	MADS-box domain-containing protein.	0.422
V4M1V6_EUTSA	V4KIE9_EUTSA	V4M1V6	V4KIE9	Uncharacterized protein.	PRONE domain-containing protein.	0.565
V4MGF9_EUTSA	V4KIE9_EUTSA	V4MGF9	V4KIE9	Protein kinase domain-containing protein.	PRONE domain-containing protein.	0.576
V4MGQ3_EUTSA	V4LE03_EUTSA	V4MGQ3	V4LE03	Uncharacterized protein.	Uncharacterized protein.	0.459
V4MGQ3_EUTSA	V4LFJ4_EUTSA	V4MGQ3	V4LFJ4	Uncharacterized protein.	Uncharacterized protein.	0.459
V4MGQ3_EUTSA	V4MQR7_EUTSA	V4MGQ3	V4MQR7	Uncharacterized protein.	Uncharacterized protein.	0.402
V4MKA1_EUTSA	V4L3K7_EUTSA	V4MKA1	V4L3K7	PRONE domain-containing protein.	Protein kinase domain-containing protein.	0.605
V4MKG1_EUTSA	V4MNE3_EUTSA	V4MKG1	V4MNE3	Protein kinase domain-containing protein.	Uncharacterized protein.	0.455

page 1 of 2

Server load: low (10%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About