(34 nodes) ER to Golgi transport vesicle membrane network (Eutrema salsugineum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	V4MBW3_EUTSA	Uncharacterized protein. (1086 aa)
	V4LLF2_EUTSA	Longin domain-containing protein; Belongs to the synaptobrevin family. (215 aa)
	V4LJA6_EUTSA	Protein transport protein sec16. (1196 aa)
	V4L9K7_EUTSA	V-SNARE domain-containing protein. (220 aa)
	V4L6N1_EUTSA	Protein transport protein sec16. (1358 aa)
	V4L031_EUTSA	Uncharacterized protein; Belongs to the synaptobrevin family. (218 aa)
	V4KYS3_EUTSA	V-SNARE domain-containing protein. (221 aa)
	V4KSK9_EUTSA	V-SNARE domain-containing protein. (222 aa)
	V4KJ38_EUTSA	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family. (193 aa)
	V4KJ06_EUTSA	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (876 aa)
	V4KIJ1_EUTSA	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family. (246 aa)
	V4KDX8_EUTSA	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family. (193 aa)
	V4M7M8_EUTSA	Membrin; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network. (226 aa)
	V4MA57_EUTSA	Uncharacterized protein. (1022 aa)
	V4MEF8_EUTSA	Uncharacterized protein; Belongs to the synaptobrevin family. (198 aa)
	V4MGR3_EUTSA	Uncharacterized protein. (154 aa)
	V4MVW4_EUTSA	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (780 aa)
	V4MX71_EUTSA	Uncharacterized protein. (80 aa)
	V4NC82_EUTSA	Membrin; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network. (222 aa)
	V4NCL9_EUTSA	WD_REPEATS_REGION domain-containing protein. (1104 aa)
	V4M4N1_EUTSA	Uncharacterized protein. (793 aa)
	V4K591_EUTSA	Uncharacterized protein. (916 aa)
	V4JYZ0_EUTSA	t-SNARE coiled-coil homology domain-containing protein. (269 aa)
	V4JWB0_EUTSA	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family. (193 aa)
	V4JSM2_EUTSA	V-SNARE domain-containing protein. (222 aa)
	V4M1D2_EUTSA	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (302 aa)
	V4M061_EUTSA	t-SNARE coiled-coil homology domain-containing protein. (271 aa)
	V4LMW8_EUTSA	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family. (193 aa)
	V4LLX0_EUTSA	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (384 aa)
	V4P999_EUTSA	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (780 aa)
	V4NYU9_EUTSA	t-SNARE coiled-coil homology domain-containing protein. (263 aa)
	V4NIK7_EUTSA	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (764 aa)
	V4NI63_EUTSA	Uncharacterized protein. (1074 aa)
	V4NEZ9_EUTSA	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (793 aa)

Your Current Organism:

Eutrema salsugineum

NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
V4JSM2_EUTSA	V4L031_EUTSA	V4JSM2	V4L031	V-SNARE domain-containing protein.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.591
V4JSM2_EUTSA	V4LLF2_EUTSA	V4JSM2	V4LLF2	V-SNARE domain-containing protein.	Longin domain-containing protein; Belongs to the synaptobrevin family.	0.591
V4JSM2_EUTSA	V4MEF8_EUTSA	V4JSM2	V4MEF8	V-SNARE domain-containing protein.	Uncharacterized protein; Belongs to the synaptobrevin family.	0.591
V4JWB0_EUTSA	V4KJ06_EUTSA	V4JWB0	V4KJ06	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.650
V4JWB0_EUTSA	V4L6N1_EUTSA	V4JWB0	V4L6N1	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	Protein transport protein sec16.	0.699
V4JWB0_EUTSA	V4LJA6_EUTSA	V4JWB0	V4LJA6	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	Protein transport protein sec16.	0.650
V4JWB0_EUTSA	V4LLX0_EUTSA	V4JWB0	V4LLX0	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.	0.976
V4JWB0_EUTSA	V4M1D2_EUTSA	V4JWB0	V4M1D2	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.	0.967
V4JWB0_EUTSA	V4M4N1_EUTSA	V4JWB0	V4M4N1	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	Uncharacterized protein.	0.771
V4JWB0_EUTSA	V4M7M8_EUTSA	V4JWB0	V4M7M8	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	Membrin; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.	0.493
V4JWB0_EUTSA	V4MA57_EUTSA	V4JWB0	V4MA57	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	Uncharacterized protein.	0.821
V4JWB0_EUTSA	V4MBW3_EUTSA	V4JWB0	V4MBW3	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	Uncharacterized protein.	0.566
V4JWB0_EUTSA	V4MVW4_EUTSA	V4JWB0	V4MVW4	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.740
V4JWB0_EUTSA	V4NC82_EUTSA	V4JWB0	V4NC82	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	Membrin; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.	0.493
V4JWB0_EUTSA	V4NCL9_EUTSA	V4JWB0	V4NCL9	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	WD_REPEATS_REGION domain-containing protein.	0.986
V4JWB0_EUTSA	V4NEZ9_EUTSA	V4JWB0	V4NEZ9	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.637
V4JWB0_EUTSA	V4NI63_EUTSA	V4JWB0	V4NI63	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	Uncharacterized protein.	0.566
V4JWB0_EUTSA	V4NIK7_EUTSA	V4JWB0	V4NIK7	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.634
V4JWB0_EUTSA	V4P999_EUTSA	V4JWB0	V4P999	Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.646
V4JYZ0_EUTSA	V4KSK9_EUTSA	V4JYZ0	V4KSK9	t-SNARE coiled-coil homology domain-containing protein.	V-SNARE domain-containing protein.	0.529

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