(19 nodes) Chlorophyll catabolic process network (Eutrema salsugineum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

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Others

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Your Input:
	V4L1M6_EUTSA	Rieske domain-containing protein. (540 aa)
	V4P9N6_EUTSA	Uncharacterized protein. (504 aa)
	V4P3Q6_EUTSA	Protein kinase domain-containing protein. (667 aa)
	V4P200_EUTSA	Uncharacterized protein. (322 aa)
	V4NF25_EUTSA	ETF domain-containing protein. (282 aa)
	V4N6T2_EUTSA	AB hydrolase-1 domain-containing protein. (487 aa)
	V4N003_EUTSA	Staygreen domain-containing protein. (273 aa)
	V4MRF2_EUTSA	AB hydrolase-1 domain-containing protein. (263 aa)
	V4MF23_EUTSA	Staygreen domain-containing protein. (266 aa)
	V4MDE5_EUTSA	Uncharacterized protein. (306 aa)
	V4M490_EUTSA	Uncharacterized protein; Belongs to the cytochrome P450 family. (506 aa)
	V4LTC5_EUTSA	Uncharacterized protein. (323 aa)
	V4LLL9_EUTSA	Uncharacterized protein. (317 aa)
	V4LKP3_EUTSA	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (373 aa)
	V4L9I1_EUTSA	Uncharacterized protein. (323 aa)
	V4L4Z1_EUTSA	Uncharacterized protein. (324 aa)
	V4KMA6_EUTSA	Staygreen domain-containing protein. (256 aa)
	V4KK89_EUTSA	Staygreen domain-containing protein. (273 aa)
	V4KIZ5_EUTSA	ABC1 domain-containing protein. (634 aa)

Your Current Organism:

Eutrema salsugineum

NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
V4KK89_EUTSA	V4L1M6_EUTSA	V4KK89	V4L1M6	Staygreen domain-containing protein.	Rieske domain-containing protein.	0.402
V4KK89_EUTSA	V4L4Z1_EUTSA	V4KK89	V4L4Z1	Staygreen domain-containing protein.	Uncharacterized protein.	0.907
V4KK89_EUTSA	V4LLL9_EUTSA	V4KK89	V4LLL9	Staygreen domain-containing protein.	Uncharacterized protein.	0.907
V4KMA6_EUTSA	V4L1M6_EUTSA	V4KMA6	V4L1M6	Staygreen domain-containing protein.	Rieske domain-containing protein.	0.570
V4KMA6_EUTSA	V4L4Z1_EUTSA	V4KMA6	V4L4Z1	Staygreen domain-containing protein.	Uncharacterized protein.	0.951
V4KMA6_EUTSA	V4LKP3_EUTSA	V4KMA6	V4LKP3	Staygreen domain-containing protein.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.595
V4KMA6_EUTSA	V4LLL9_EUTSA	V4KMA6	V4LLL9	Staygreen domain-containing protein.	Uncharacterized protein.	0.943
V4KMA6_EUTSA	V4N6T2_EUTSA	V4KMA6	V4N6T2	Staygreen domain-containing protein.	AB hydrolase-1 domain-containing protein.	0.505
V4KMA6_EUTSA	V4P9N6_EUTSA	V4KMA6	V4P9N6	Staygreen domain-containing protein.	Uncharacterized protein.	0.568
V4L1M6_EUTSA	V4KK89_EUTSA	V4L1M6	V4KK89	Rieske domain-containing protein.	Staygreen domain-containing protein.	0.402
V4L1M6_EUTSA	V4KMA6_EUTSA	V4L1M6	V4KMA6	Rieske domain-containing protein.	Staygreen domain-containing protein.	0.570
V4L1M6_EUTSA	V4L4Z1_EUTSA	V4L1M6	V4L4Z1	Rieske domain-containing protein.	Uncharacterized protein.	0.567
V4L1M6_EUTSA	V4L9I1_EUTSA	V4L1M6	V4L9I1	Rieske domain-containing protein.	Uncharacterized protein.	0.953
V4L1M6_EUTSA	V4LKP3_EUTSA	V4L1M6	V4LKP3	Rieske domain-containing protein.	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.	0.679
V4L1M6_EUTSA	V4LLL9_EUTSA	V4L1M6	V4LLL9	Rieske domain-containing protein.	Uncharacterized protein.	0.578
V4L1M6_EUTSA	V4LTC5_EUTSA	V4L1M6	V4LTC5	Rieske domain-containing protein.	Uncharacterized protein.	0.953
V4L1M6_EUTSA	V4M490_EUTSA	V4L1M6	V4M490	Rieske domain-containing protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.406
V4L1M6_EUTSA	V4MF23_EUTSA	V4L1M6	V4MF23	Rieske domain-containing protein.	Staygreen domain-containing protein.	0.660
V4L1M6_EUTSA	V4MRF2_EUTSA	V4L1M6	V4MRF2	Rieske domain-containing protein.	AB hydrolase-1 domain-containing protein.	0.928
V4L1M6_EUTSA	V4N003_EUTSA	V4L1M6	V4N003	Rieske domain-containing protein.	Staygreen domain-containing protein.	0.402

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