STRINGSTRING
V4MYX0_EUTSA V4MYX0_EUTSA V4N7D6_EUTSA V4N7D6_EUTSA V4NB10_EUTSA V4NB10_EUTSA V4P5G2_EUTSA V4P5G2_EUTSA V4L2F4_EUTSA V4L2F4_EUTSA V4L3K9_EUTSA V4L3K9_EUTSA V4LEG2_EUTSA V4LEG2_EUTSA V4LFZ2_EUTSA V4LFZ2_EUTSA V4LG65_EUTSA V4LG65_EUTSA EIF6 EIF6 V4LVB1_EUTSA V4LVB1_EUTSA V4LYK4_EUTSA V4LYK4_EUTSA V4M4B5_EUTSA V4M4B5_EUTSA V4KMK5_EUTSA V4KMK5_EUTSA V4M6K9_EUTSA V4M6K9_EUTSA V4MBC8_EUTSA V4MBC8_EUTSA V4MC22_EUTSA V4MC22_EUTSA V4MFM9_EUTSA V4MFM9_EUTSA EIF6-2 EIF6-2 V4KML1_EUTSA V4KML1_EUTSA V4KP83_EUTSA V4KP83_EUTSA V4KRL1_EUTSA V4KRL1_EUTSA V4KVX2_EUTSA V4KVX2_EUTSA V4KWP0_EUTSA V4KWP0_EUTSA V4MKA8_EUTSA V4MKA8_EUTSA V4N6I7_EUTSA V4N6I7_EUTSA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
V4MYX0_EUTSABrix domain-containing protein. (349 aa)
V4N7D6_EUTSARibosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. (429 aa)
V4NB10_EUTSABrix domain-containing protein. (291 aa)
V4P5G2_EUTSAPutative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. (821 aa)
V4L2F4_EUTSAWD_REPEATS_REGION domain-containing protein. (441 aa)
V4L3K9_EUTSAUncharacterized protein. (500 aa)
V4LEG2_EUTSAUncharacterized protein. (535 aa)
V4LFZ2_EUTSAFtsJ domain-containing protein. (229 aa)
V4LG65_EUTSAPescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (591 aa)
EIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (245 aa)
V4LVB1_EUTSAC2H2-type domain-containing protein. (403 aa)
V4LYK4_EUTSAUncharacterized protein. (294 aa)
V4M4B5_EUTSAUncharacterized protein. (79 aa)
V4KMK5_EUTSAUncharacterized protein. (314 aa)
V4M6K9_EUTSAUncharacterized protein. (776 aa)
V4MBC8_EUTSARibosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (316 aa)
V4MC22_EUTSAMidasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (5391 aa)
V4MFM9_EUTSAC2H2-type domain-containing protein. (402 aa)
EIF6-2Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (247 aa)
V4KML1_EUTSARibosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (774 aa)
V4KP83_EUTSABrix domain-containing protein. (348 aa)
V4KRL1_EUTSAUncharacterized protein. (260 aa)
V4KVX2_EUTSARibosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (229 aa)
V4KWP0_EUTSAProtein MAK16 homolog; Belongs to the MAK16 family. (301 aa)
V4MKA8_EUTSA60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (187 aa)
V4N6I7_EUTSAUncharacterized protein. (614 aa)
Your Current Organism:
Eutrema salsugineum
NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress
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