(60 nodes) Photoperiodism, flowering network (Eutrema salsugineum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	V4JRY4_EUTSA	Uncharacterized protein. (487 aa)
	V4K8B2_EUTSA	Glyco_transf_20 domain-containing protein. (951 aa)
	V4K9P5_EUTSA	Uncharacterized protein; Belongs to the actin family. (440 aa)
	V4KFG5_EUTSA	Photolyase/cryptochrome alpha/beta domain-containing protein. (621 aa)
	V4KFQ1_EUTSA	Uncharacterized protein. (426 aa)
	V4KI48_EUTSA	Peptidase S59 domain-containing protein. (963 aa)
	V4KIN7_EUTSA	Peptidase S59 domain-containing protein. (1042 aa)
	V4KKA9_EUTSA	BHLH domain-containing protein. (459 aa)
	V4KMX7_EUTSA	Uncharacterized protein. (412 aa)
	V4KR52_EUTSA	Uncharacterized protein. (818 aa)
	V4KSG6_EUTSA	Uncharacterized protein. (367 aa)
	V4KU10_EUTSA	Uncharacterized protein. (91 aa)
	V4KVI3_EUTSA	ZF-HD dimerization-type domain-containing protein. (318 aa)
	V4KVP5_EUTSA	Uncharacterized protein. (308 aa)
	V4KWT4_EUTSA	Peptidase S59 domain-containing protein. (1042 aa)
	V4KZD5_EUTSA	WD_REPEATS_REGION domain-containing protein. (346 aa)
	V4L005_EUTSA	Uncharacterized protein. (590 aa)
	V4L0P3_EUTSA	Fibronectin type-III domain-containing protein. (616 aa)
	V4L368_EUTSA	HTH myb-type domain-containing protein. (647 aa)
	V4L398_EUTSA	Uncharacterized protein. (282 aa)
	V4L440_EUTSA	NTP_transferase domain-containing protein. (378 aa)
	V4L5B1_EUTSA	Protein kinase domain-containing protein. (656 aa)
	V4L714_EUTSA	WD_REPEATS_REGION domain-containing protein. (346 aa)
	V4L9R5_EUTSA	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (286 aa)
	V4LAE8_EUTSA	Uncharacterized protein. (794 aa)
	V4LB29_EUTSA	Protein kinase domain-containing protein. (615 aa)
	V4LDI2_EUTSA	Chromo domain-containing protein. (439 aa)
	V4LDW5_EUTSA	Protein kinase domain-containing protein. (703 aa)
	V4LHF3_EUTSA	Uncharacterized protein. (2173 aa)
	V4LHL1_EUTSA	Uncharacterized protein. (777 aa)
	V4LI10_EUTSA	NAC domain-containing protein. (328 aa)
	V4LNK3_EUTSA	Protein kinase domain-containing protein. (549 aa)
	V4LQ50_EUTSA	C2H2-type domain-containing protein. (416 aa)
	V4LQ72_EUTSA	Uncharacterized protein. (421 aa)
	V4LTY7_EUTSA	Uncharacterized protein. (159 aa)
	V4LYV0_EUTSA	NAC domain-containing protein. (451 aa)
	V4M1E9_EUTSA	U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase; Belongs to the methyltransferase superfamily. METTL16/RlmF family. (489 aa)
	V4M9P5_EUTSA	HTH myb-type domain-containing protein. (303 aa)
	V4MAM1_EUTSA	PARP catalytic domain-containing protein. (571 aa)
	V4MCM7_EUTSA	BHLH domain-containing protein. (363 aa)
	V4MDW1_EUTSA	Uncharacterized protein. (1209 aa)
	V4MER4_EUTSA	CBFD_NFYB_HMF domain-containing protein. (217 aa)
	V4MF45_EUTSA	MIF4G domain-containing protein. (848 aa)
	V4MIV7_EUTSA	Uncharacterized protein. (941 aa)
	V4MJ24_EUTSA	Uncharacterized protein. (570 aa)
	V4MKN0_EUTSA	Homeobox domain-containing protein. (302 aa)
	V4MM13_EUTSA	Glucose-1-phosphate adenylyltransferase; This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP-glucose from Glc-1-P and ATP. (523 aa)
	V4MQP3_EUTSA	Uncharacterized protein. (484 aa)
	V4MT18_EUTSA	Uncharacterized protein; Belongs to the actin family. (443 aa)
	V4MVS9_EUTSA	Uncharacterized protein. (244 aa)
	V4MXE1_EUTSA	Xyloglucan endotransglucosylase/hydrolase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. Belongs to the glycosyl hydrolase 16 family. (292 aa)
	V4NF43_EUTSA	Photolyase/cryptochrome alpha/beta domain-containing protein. (612 aa)
	V4NK60_EUTSA	Protein kinase domain-containing protein. (567 aa)
	V4NQY6_EUTSA	NAC domain-containing protein. (440 aa)
	V4NTW0_EUTSA	NAC domain-containing protein. (356 aa)
	V4NU71_EUTSA	Uncharacterized protein. (672 aa)
	V4NY64_EUTSA	Uncharacterized protein. (678 aa)
	V4P0C5_EUTSA	Elf4 domain-containing protein. (115 aa)
	V4P0Z4_EUTSA	Uncharacterized protein. (457 aa)
	V4P5I7_EUTSA	Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (386 aa)

Your Current Organism:

Eutrema salsugineum

NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
V4K8B2_EUTSA	V4L440_EUTSA	V4K8B2	V4L440	Glyco_transf_20 domain-containing protein.	NTP_transferase domain-containing protein.	0.650
V4K8B2_EUTSA	V4MM13_EUTSA	V4K8B2	V4MM13	Glyco_transf_20 domain-containing protein.	Glucose-1-phosphate adenylyltransferase; This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP-glucose from Glc-1-P and ATP.	0.650
V4KFG5_EUTSA	V4L368_EUTSA	V4KFG5	V4L368	Photolyase/cryptochrome alpha/beta domain-containing protein.	HTH myb-type domain-containing protein.	0.422
V4KFG5_EUTSA	V4LHL1_EUTSA	V4KFG5	V4LHL1	Photolyase/cryptochrome alpha/beta domain-containing protein.	Uncharacterized protein.	0.974
V4KFG5_EUTSA	V4NF43_EUTSA	V4KFG5	V4NF43	Photolyase/cryptochrome alpha/beta domain-containing protein.	Photolyase/cryptochrome alpha/beta domain-containing protein.	0.901
V4KFG5_EUTSA	V4NU71_EUTSA	V4KFG5	V4NU71	Photolyase/cryptochrome alpha/beta domain-containing protein.	Uncharacterized protein.	0.940
V4KFG5_EUTSA	V4NY64_EUTSA	V4KFG5	V4NY64	Photolyase/cryptochrome alpha/beta domain-containing protein.	Uncharacterized protein.	0.981
V4KFG5_EUTSA	V4P0C5_EUTSA	V4KFG5	V4P0C5	Photolyase/cryptochrome alpha/beta domain-containing protein.	Elf4 domain-containing protein.	0.518
V4KI48_EUTSA	V4KIN7_EUTSA	V4KI48	V4KIN7	Peptidase S59 domain-containing protein.	Peptidase S59 domain-containing protein.	0.913
V4KI48_EUTSA	V4KWT4_EUTSA	V4KI48	V4KWT4	Peptidase S59 domain-containing protein.	Peptidase S59 domain-containing protein.	0.902
V4KI48_EUTSA	V4MF45_EUTSA	V4KI48	V4MF45	Peptidase S59 domain-containing protein.	MIF4G domain-containing protein.	0.641
V4KIN7_EUTSA	V4KI48_EUTSA	V4KIN7	V4KI48	Peptidase S59 domain-containing protein.	Peptidase S59 domain-containing protein.	0.913
V4KIN7_EUTSA	V4KWT4_EUTSA	V4KIN7	V4KWT4	Peptidase S59 domain-containing protein.	Peptidase S59 domain-containing protein.	0.931
V4KIN7_EUTSA	V4MF45_EUTSA	V4KIN7	V4MF45	Peptidase S59 domain-containing protein.	MIF4G domain-containing protein.	0.641
V4KKA9_EUTSA	V4NU71_EUTSA	V4KKA9	V4NU71	BHLH domain-containing protein.	Uncharacterized protein.	0.420
V4KSG6_EUTSA	V4NU71_EUTSA	V4KSG6	V4NU71	Uncharacterized protein.	Uncharacterized protein.	0.436
V4KVP5_EUTSA	V4L398_EUTSA	V4KVP5	V4L398	Uncharacterized protein.	Uncharacterized protein.	0.901
V4KVP5_EUTSA	V4MF45_EUTSA	V4KVP5	V4MF45	Uncharacterized protein.	MIF4G domain-containing protein.	0.604
V4KWT4_EUTSA	V4KI48_EUTSA	V4KWT4	V4KI48	Peptidase S59 domain-containing protein.	Peptidase S59 domain-containing protein.	0.902
V4KWT4_EUTSA	V4KIN7_EUTSA	V4KWT4	V4KIN7	Peptidase S59 domain-containing protein.	Peptidase S59 domain-containing protein.	0.931

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