(19 nodes) Root cap development network (Eutrema salsugineum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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Predicted Interactions

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Your Input:
	V4MBE1_EUTSA	Aa_trans domain-containing protein. (492 aa)
	V4MCQ2_EUTSA	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). (672 aa)
	V4P9K2_EUTSA	Uncharacterized protein. (147 aa)
	V4NLW5_EUTSA	Uncharacterized protein. (382 aa)
	V4MFJ2_EUTSA	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). (702 aa)
	V4N0L8_EUTSA	NAC domain-containing protein. (342 aa)
	V4JU02_EUTSA	Uncharacterized protein. (397 aa)
	V4KC83_EUTSA	Aa_trans domain-containing protein. (469 aa)
	V4KIT3_EUTSA	NAC domain-containing protein. (376 aa)
	V4KWA8_EUTSA	NAC domain-containing protein. (425 aa)
	V4L140_EUTSA	NAC domain-containing protein. (320 aa)
	V4L4B3_EUTSA	Gln-synt_C domain-containing protein; Belongs to the glutamine synthetase family. (846 aa)
	V4LCJ4_EUTSA	Aa_trans domain-containing protein. (492 aa)
	V4LNU6_EUTSA	Uncharacterized protein. (895 aa)
	V4LQX9_EUTSA	Uncharacterized protein. (209 aa)
	V4LU61_EUTSA	Aa_trans domain-containing protein. (481 aa)
	V4M1W6_EUTSA	Uncharacterized protein. (68 aa)
	V4M5U1_EUTSA	Uncharacterized protein. (749 aa)
	V4MAQ7_EUTSA	NAC domain-containing protein. (400 aa)

Your Current Organism:

Eutrema salsugineum

NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
V4KIT3_EUTSA	V4MCQ2_EUTSA	V4KIT3	V4MCQ2	NAC domain-containing protein.	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	0.467
V4KIT3_EUTSA	V4MFJ2_EUTSA	V4KIT3	V4MFJ2	NAC domain-containing protein.	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	0.435
V4KWA8_EUTSA	V4MCQ2_EUTSA	V4KWA8	V4MCQ2	NAC domain-containing protein.	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	0.521
V4KWA8_EUTSA	V4MFJ2_EUTSA	V4KWA8	V4MFJ2	NAC domain-containing protein.	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	0.465
V4L140_EUTSA	V4MFJ2_EUTSA	V4L140	V4MFJ2	NAC domain-containing protein.	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	0.418
V4MAQ7_EUTSA	V4MCQ2_EUTSA	V4MAQ7	V4MCQ2	NAC domain-containing protein.	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	0.533
V4MAQ7_EUTSA	V4MFJ2_EUTSA	V4MAQ7	V4MFJ2	NAC domain-containing protein.	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	0.507
V4MBE1_EUTSA	V4MCQ2_EUTSA	V4MBE1	V4MCQ2	Aa_trans domain-containing protein.	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	0.547
V4MBE1_EUTSA	V4MFJ2_EUTSA	V4MBE1	V4MFJ2	Aa_trans domain-containing protein.	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	0.576
V4MCQ2_EUTSA	V4KIT3_EUTSA	V4MCQ2	V4KIT3	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	NAC domain-containing protein.	0.467
V4MCQ2_EUTSA	V4KWA8_EUTSA	V4MCQ2	V4KWA8	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	NAC domain-containing protein.	0.521
V4MCQ2_EUTSA	V4MAQ7_EUTSA	V4MCQ2	V4MAQ7	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	NAC domain-containing protein.	0.533
V4MCQ2_EUTSA	V4MBE1_EUTSA	V4MCQ2	V4MBE1	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	Aa_trans domain-containing protein.	0.547
V4MFJ2_EUTSA	V4KIT3_EUTSA	V4MFJ2	V4KIT3	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	NAC domain-containing protein.	0.435
V4MFJ2_EUTSA	V4KWA8_EUTSA	V4MFJ2	V4KWA8	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	NAC domain-containing protein.	0.465
V4MFJ2_EUTSA	V4L140_EUTSA	V4MFJ2	V4L140	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	NAC domain-containing protein.	0.418
V4MFJ2_EUTSA	V4MAQ7_EUTSA	V4MFJ2	V4MAQ7	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	NAC domain-containing protein.	0.507
V4MFJ2_EUTSA	V4MBE1_EUTSA	V4MFJ2	V4MBE1	Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs).	Aa_trans domain-containing protein.	0.576

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