(34 nodes) PA domain network (Eutrema salsugineum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	V4LDR8_EUTSA	Uncharacterized protein; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (1359 aa)
	V4LIT7_EUTSA	Uncharacterized protein; Belongs to the peptidase S8 family. (512 aa)
	V4N9C0_EUTSA	Uncharacterized protein; Belongs to the peptidase S8 family. (761 aa)
	V4L231_EUTSA	PA domain-containing protein. (544 aa)
	V4L4F4_EUTSA	EGF_CA domain-containing protein. (654 aa)
	V4MA39_EUTSA	RING-type domain-containing protein. (447 aa)
	V4MB70_EUTSA	Uncharacterized protein; Belongs to the peptidase S8 family. (768 aa)
	V4MIY2_EUTSA	EGF_CA domain-containing protein. (629 aa)
	V4MRY3_EUTSA	RING-type domain-containing protein. (409 aa)
	V4MS28_EUTSA	Uncharacterized protein; Belongs to the peptidase S8 family. (683 aa)
	V4L1X4_EUTSA	EGF_CA domain-containing protein. (631 aa)
	V4KGW7_EUTSA	Uncharacterized protein; Belongs to the peptidase S8 family. (773 aa)
	V4KIT5_EUTSA	RING-type domain-containing protein. (286 aa)
	V4KJ51_EUTSA	Uncharacterized protein; Belongs to the peptidase S8 family. (758 aa)
	V4KKV6_EUTSA	Uncharacterized protein; Belongs to the peptidase S8 family. (723 aa)
	V4KPV0_EUTSA	Uncharacterized protein; Belongs to the peptidase S8 family. (763 aa)
	V4NW82_EUTSA	EGF_CA domain-containing protein. (626 aa)
	V4NPU4_EUTSA	Uncharacterized protein; Belongs to the peptidase S8 family. (779 aa)
	V4KGB1_EUTSA	Uncharacterized protein; Belongs to the peptidase S8 family. (766 aa)
	V4KD36_EUTSA	PA domain-containing protein. (540 aa)
	V4N9I4_EUTSA	Uncharacterized protein; Belongs to the peptidase S8 family. (741 aa)
	V4KYT2_EUTSA	Uncharacterized protein; Belongs to the peptidase S8 family. (778 aa)
	V4KZG5_EUTSA	Uncharacterized protein; Belongs to the peptidase S8 family. (779 aa)
	V4KZJ9_EUTSA	PA domain-containing protein. (538 aa)
	V4LJ61_EUTSA	Uncharacterized protein; Belongs to the peptidase S8 family. (815 aa)
	V4LQA1_EUTSA	Uncharacterized protein. (673 aa)
	V4LR49_EUTSA	PA domain-containing protein. (543 aa)
	V4M4F4_EUTSA	EGF_CA domain-containing protein. (631 aa)
	V4M754_EUTSA	EGF_CA domain-containing protein. (625 aa)
	V4M896_EUTSA	EGF_CA domain-containing protein. (622 aa)
	V4L4S1_EUTSA	RING-type domain-containing protein. (439 aa)
	V4L7S8_EUTSA	Uncharacterized protein; Belongs to the peptidase S8 family. (792 aa)
	V4L8R6_EUTSA	EGF_CA domain-containing protein. (627 aa)
	V4LAU9_EUTSA	Uncharacterized protein; Belongs to the peptidase S8 family. (762 aa)

Your Current Organism:

Eutrema salsugineum

NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
V4KIT5_EUTSA	V4L4F4_EUTSA	V4KIT5	V4L4F4	RING-type domain-containing protein.	EGF_CA domain-containing protein.	0.584
V4KIT5_EUTSA	V4MIY2_EUTSA	V4KIT5	V4MIY2	RING-type domain-containing protein.	EGF_CA domain-containing protein.	0.410
V4L4F4_EUTSA	V4KIT5_EUTSA	V4L4F4	V4KIT5	EGF_CA domain-containing protein.	RING-type domain-containing protein.	0.584
V4L4F4_EUTSA	V4MA39_EUTSA	V4L4F4	V4MA39	EGF_CA domain-containing protein.	RING-type domain-containing protein.	0.519
V4MA39_EUTSA	V4L4F4_EUTSA	V4MA39	V4L4F4	RING-type domain-containing protein.	EGF_CA domain-containing protein.	0.519
V4MIY2_EUTSA	V4KIT5_EUTSA	V4MIY2	V4KIT5	EGF_CA domain-containing protein.	RING-type domain-containing protein.	0.410

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