(8 nodes) K homology domain-like, alpha/beta network (Eutrema salsugineum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	V4MGR0_EUTSA	KH type-2 domain-containing protein. (249 aa)
	V4KUL4_EUTSA	Uncharacterized protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Era GTPase family. (440 aa)
	V4KMH3_EUTSA	Era-type G domain-containing protein. (429 aa)
	V4L9G9_EUTSA	Uncharacterized protein. (631 aa)
	V4MLN3_EUTSA	Uncharacterized protein. (214 aa)
	V4NI98_EUTSA	KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family. (218 aa)
	V4LEC1_EUTSA	Uncharacterized protein. (664 aa)
	V4M9G9_EUTSA	KH type-2 domain-containing protein. (249 aa)

Your Current Organism:

Eutrema salsugineum

NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
V4KMH3_EUTSA	V4L9G9_EUTSA	V4KMH3	V4L9G9	Era-type G domain-containing protein.	Uncharacterized protein.	0.617
V4KMH3_EUTSA	V4LEC1_EUTSA	V4KMH3	V4LEC1	Era-type G domain-containing protein.	Uncharacterized protein.	0.617
V4KMH3_EUTSA	V4MLN3_EUTSA	V4KMH3	V4MLN3	Era-type G domain-containing protein.	Uncharacterized protein.	0.637
V4KUL4_EUTSA	V4L9G9_EUTSA	V4KUL4	V4L9G9	Uncharacterized protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Era GTPase family.	Uncharacterized protein.	0.617
V4KUL4_EUTSA	V4LEC1_EUTSA	V4KUL4	V4LEC1	Uncharacterized protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Era GTPase family.	Uncharacterized protein.	0.617
V4KUL4_EUTSA	V4MLN3_EUTSA	V4KUL4	V4MLN3	Uncharacterized protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Era GTPase family.	Uncharacterized protein.	0.637
V4L9G9_EUTSA	V4KMH3_EUTSA	V4L9G9	V4KMH3	Uncharacterized protein.	Era-type G domain-containing protein.	0.617
V4L9G9_EUTSA	V4KUL4_EUTSA	V4L9G9	V4KUL4	Uncharacterized protein.	Uncharacterized protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Era GTPase family.	0.617
V4LEC1_EUTSA	V4KMH3_EUTSA	V4LEC1	V4KMH3	Uncharacterized protein.	Era-type G domain-containing protein.	0.617
V4LEC1_EUTSA	V4KUL4_EUTSA	V4LEC1	V4KUL4	Uncharacterized protein.	Uncharacterized protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Era GTPase family.	0.617
V4M9G9_EUTSA	V4MGR0_EUTSA	V4M9G9	V4MGR0	KH type-2 domain-containing protein.	KH type-2 domain-containing protein.	0.900
V4M9G9_EUTSA	V4MLN3_EUTSA	V4M9G9	V4MLN3	KH type-2 domain-containing protein.	Uncharacterized protein.	0.802
V4M9G9_EUTSA	V4NI98_EUTSA	V4M9G9	V4NI98	KH type-2 domain-containing protein.	KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.	0.839
V4MGR0_EUTSA	V4M9G9_EUTSA	V4MGR0	V4M9G9	KH type-2 domain-containing protein.	KH type-2 domain-containing protein.	0.900
V4MGR0_EUTSA	V4MLN3_EUTSA	V4MGR0	V4MLN3	KH type-2 domain-containing protein.	Uncharacterized protein.	0.802
V4MGR0_EUTSA	V4NI98_EUTSA	V4MGR0	V4NI98	KH type-2 domain-containing protein.	KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.	0.839
V4MLN3_EUTSA	V4KMH3_EUTSA	V4MLN3	V4KMH3	Uncharacterized protein.	Era-type G domain-containing protein.	0.637
V4MLN3_EUTSA	V4KUL4_EUTSA	V4MLN3	V4KUL4	Uncharacterized protein.	Uncharacterized protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Era GTPase family.	0.637
V4MLN3_EUTSA	V4M9G9_EUTSA	V4MLN3	V4M9G9	Uncharacterized protein.	KH type-2 domain-containing protein.	0.802
V4MLN3_EUTSA	V4MGR0_EUTSA	V4MLN3	V4MGR0	Uncharacterized protein.	KH type-2 domain-containing protein.	0.802

page 1 of 2

Server load: low (28%) [HD]

Permalink

Network

Neighborhood

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About