(22 nodes) Protein-tyrosine phosphatase, active site network (Eutrema salsugineum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	V4LH23_EUTSA	Uncharacterized protein. (203 aa)
	V4LNQ7_EUTSA	Uncharacterized protein. (334 aa)
	V4M9F6_EUTSA	Myotubularin phosphatase domain-containing protein. (841 aa)
	V4M9U6_EUTSA	Uncharacterized protein. (260 aa)
	V4MLH4_EUTSA	TYR_PHOSPHATASE_2 domain-containing protein. (597 aa)
	V4NAB8_EUTSA	Uncharacterized protein. (240 aa)
	V4NNA2_EUTSA	Uncharacterized protein. (603 aa)
	V4LP20_EUTSA	Uncharacterized protein. (640 aa)
	V4LQZ4_EUTSA	Uncharacterized protein. (792 aa)
	V4M2S3_EUTSA	Uncharacterized protein. (669 aa)
	V4JS01_EUTSA	Uncharacterized protein. (414 aa)
	V4K1X6_EUTSA	Uncharacterized protein. (935 aa)
	V4K6M8_EUTSA	Uncharacterized protein. (209 aa)
	V4KRV0_EUTSA	Uncharacterized protein. (304 aa)
	V4KYG2_EUTSA	Uncharacterized protein. (212 aa)
	V4L3I4_EUTSA	Uncharacterized protein. (321 aa)
	V4L406_EUTSA	Uncharacterized protein. (260 aa)
	V4L762_EUTSA	TYR_PHOSPHATASE_2 domain-containing protein. (200 aa)
	V4L7S2_EUTSA	TYR_PHOSPHATASE_2 domain-containing protein. (663 aa)
	V4L9L5_EUTSA	Uncharacterized protein. (414 aa)
	V4LD75_EUTSA	Uncharacterized protein. (203 aa)
	V4LD85_EUTSA	Myotubularin phosphatase domain-containing protein. (833 aa)

Your Current Organism:

Eutrema salsugineum

NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
V4JS01_EUTSA	V4K1X6_EUTSA	V4JS01	V4K1X6	Uncharacterized protein.	Uncharacterized protein.	0.545
V4JS01_EUTSA	V4K6M8_EUTSA	V4JS01	V4K6M8	Uncharacterized protein.	Uncharacterized protein.	0.446
V4JS01_EUTSA	V4KYG2_EUTSA	V4JS01	V4KYG2	Uncharacterized protein.	Uncharacterized protein.	0.412
V4JS01_EUTSA	V4L406_EUTSA	V4JS01	V4L406	Uncharacterized protein.	Uncharacterized protein.	0.446
V4JS01_EUTSA	V4L762_EUTSA	V4JS01	V4L762	Uncharacterized protein.	TYR_PHOSPHATASE_2 domain-containing protein.	0.545
V4JS01_EUTSA	V4L9L5_EUTSA	V4JS01	V4L9L5	Uncharacterized protein.	Uncharacterized protein.	0.446
V4JS01_EUTSA	V4LQZ4_EUTSA	V4JS01	V4LQZ4	Uncharacterized protein.	Uncharacterized protein.	0.618
V4K1X6_EUTSA	V4JS01_EUTSA	V4K1X6	V4JS01	Uncharacterized protein.	Uncharacterized protein.	0.545
V4K1X6_EUTSA	V4KYG2_EUTSA	V4K1X6	V4KYG2	Uncharacterized protein.	Uncharacterized protein.	0.422
V4K1X6_EUTSA	V4L3I4_EUTSA	V4K1X6	V4L3I4	Uncharacterized protein.	Uncharacterized protein.	0.422
V4K1X6_EUTSA	V4L762_EUTSA	V4K1X6	V4L762	Uncharacterized protein.	TYR_PHOSPHATASE_2 domain-containing protein.	0.547
V4K1X6_EUTSA	V4L9L5_EUTSA	V4K1X6	V4L9L5	Uncharacterized protein.	Uncharacterized protein.	0.547
V4K1X6_EUTSA	V4LD75_EUTSA	V4K1X6	V4LD75	Uncharacterized protein.	Uncharacterized protein.	0.545
V4K1X6_EUTSA	V4LH23_EUTSA	V4K1X6	V4LH23	Uncharacterized protein.	Uncharacterized protein.	0.582
V4K1X6_EUTSA	V4LNQ7_EUTSA	V4K1X6	V4LNQ7	Uncharacterized protein.	Uncharacterized protein.	0.545
V4K1X6_EUTSA	V4LP20_EUTSA	V4K1X6	V4LP20	Uncharacterized protein.	Uncharacterized protein.	0.545
V4K1X6_EUTSA	V4M9F6_EUTSA	V4K1X6	V4M9F6	Uncharacterized protein.	Myotubularin phosphatase domain-containing protein.	0.422
V4K1X6_EUTSA	V4M9U6_EUTSA	V4K1X6	V4M9U6	Uncharacterized protein.	Uncharacterized protein.	0.547
V4K1X6_EUTSA	V4NAB8_EUTSA	V4K1X6	V4NAB8	Uncharacterized protein.	Uncharacterized protein.	0.555
V4K1X6_EUTSA	V4NNA2_EUTSA	V4K1X6	V4NNA2	Uncharacterized protein.	Uncharacterized protein.	0.422

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