STRINGSTRING
V4MHM2_EUTSA V4MHM2_EUTSA V4MF74_EUTSA V4MF74_EUTSA V4MDK4_EUTSA V4MDK4_EUTSA V4M9D5_EUTSA V4M9D5_EUTSA V4LW38_EUTSA V4LW38_EUTSA V4LEB6_EUTSA V4LEB6_EUTSA V4LDG2_EUTSA V4LDG2_EUTSA V4L6U9_EUTSA V4L6U9_EUTSA V4KZT1_EUTSA V4KZT1_EUTSA V4KYL7_EUTSA V4KYL7_EUTSA V4JXZ9_EUTSA V4JXZ9_EUTSA V4JQ38_EUTSA V4JQ38_EUTSA V4MKP0_EUTSA V4MKP0_EUTSA V4N8M3_EUTSA V4N8M3_EUTSA V4MTQ1_EUTSA V4MTQ1_EUTSA V4MMR0_EUTSA V4MMR0_EUTSA V4M5T3_EUTSA V4M5T3_EUTSA V4NXY5_EUTSA V4NXY5_EUTSA V4NCR7_EUTSA V4NCR7_EUTSA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
V4MHM2_EUTSARibosomal_L7Ae domain-containing protein. (256 aa)
V4MF74_EUTSARibonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
V4MDK4_EUTSAProtein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (378 aa)
V4M9D5_EUTSARibonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (156 aa)
V4LW38_EUTSARibosomal_L7Ae domain-containing protein. (112 aa)
V4LEB6_EUTSARibonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (155 aa)
V4LDG2_EUTSARibosomal_L7Ae domain-containing protein. (167 aa)
V4L6U9_EUTSARibosomal_L7Ae domain-containing protein. (256 aa)
V4KZT1_EUTSAeRF1_1 domain-containing protein. (435 aa)
V4KYL7_EUTSAeRF1_1 domain-containing protein. (460 aa)
V4JXZ9_EUTSAUncharacterized protein. (304 aa)
V4JQ38_EUTSARibosomal_L7Ae domain-containing protein. (112 aa)
V4MKP0_EUTSASpoU_methylase domain-containing protein. (355 aa)
V4N8M3_EUTSARibonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
V4MTQ1_EUTSA40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (142 aa)
V4MMR0_EUTSAeRF1_1 domain-containing protein. (435 aa)
V4M5T3_EUTSASpoU_sub_bind domain-containing protein. (604 aa)
V4NXY5_EUTSA40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (143 aa)
V4NCR7_EUTSARibosomal_L7Ae domain-containing protein. (256 aa)
Your Current Organism:
Eutrema salsugineum
NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress
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