(10 nodes) Domain in DAP-5, eIF4G, MA-3 and other proteins. network (Eutrema salsugineum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	V4LW02_EUTSA	MI domain-containing protein. (1738 aa)
	V4P5P6_EUTSA	Uncharacterized protein. (703 aa)
	V4NA00_EUTSA	MI domain-containing protein. (780 aa)
	V4N7Y9_EUTSA	MI domain-containing protein. (781 aa)
	V4MET3_EUTSA	MI domain-containing protein. (676 aa)
	V4K136_EUTSA	Uncharacterized protein. (702 aa)
	V4K815_EUTSA	MI domain-containing protein. (935 aa)
	V4KA47_EUTSA	Uncharacterized protein. (747 aa)
	V4L7L1_EUTSA	MI domain-containing protein. (747 aa)
	V4LF88_EUTSA	MI domain-containing protein. (519 aa)

Your Current Organism:

Eutrema salsugineum

NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
V4KA47_EUTSA	V4L7L1_EUTSA	V4KA47	V4L7L1	Uncharacterized protein.	MI domain-containing protein.	0.532
V4L7L1_EUTSA	V4KA47_EUTSA	V4L7L1	V4KA47	MI domain-containing protein.	Uncharacterized protein.	0.532
V4L7L1_EUTSA	V4LW02_EUTSA	V4L7L1	V4LW02	MI domain-containing protein.	MI domain-containing protein.	0.912
V4L7L1_EUTSA	V4NA00_EUTSA	V4L7L1	V4NA00	MI domain-containing protein.	MI domain-containing protein.	0.902
V4LW02_EUTSA	V4L7L1_EUTSA	V4LW02	V4L7L1	MI domain-containing protein.	MI domain-containing protein.	0.912
V4LW02_EUTSA	V4NA00_EUTSA	V4LW02	V4NA00	MI domain-containing protein.	MI domain-containing protein.	0.914
V4NA00_EUTSA	V4L7L1_EUTSA	V4NA00	V4L7L1	MI domain-containing protein.	MI domain-containing protein.	0.902
V4NA00_EUTSA	V4LW02_EUTSA	V4NA00	V4LW02	MI domain-containing protein.	MI domain-containing protein.	0.914

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