(39 nodes) Autophagy - other network (Eutrema salsugineum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	V4KEH6_EUTSA	Serine/threonine-protein phosphatase. (306 aa)
	V4KFR4_EUTSA	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. Belongs to the ATG12 family. (94 aa)
	V4KI29_EUTSA	Serine/threonine-protein phosphatase. (306 aa)
	V4KKN6_EUTSA	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. (2479 aa)
	V4KKP4_EUTSA	Autophagy-related protein 3. (314 aa)
	V4KQ66_EUTSA	WD_REPEATS_REGION domain-containing protein. (1354 aa)
	V4KUZ1_EUTSA	Uncharacterized protein. (218 aa)
	V4KZ00_EUTSA	Uncharacterized protein. (405 aa)
	V4L039_EUTSA	WD_REPEATS_REGION domain-containing protein. (502 aa)
	V4L0V2_EUTSA	Uncharacterized protein. (515 aa)
	V4L1E6_EUTSA	Cysteine protease. (474 aa)
	V4L5H7_EUTSA	ATG13 domain-containing protein. (603 aa)
	V4L725_EUTSA	Autophagy-related protein. (120 aa)
	V4L7D1_EUTSA	Autophagy-related protein. (119 aa)
	V4L7R8_EUTSA	Serine/threonine-protein phosphatase. (306 aa)
	V4LC48_EUTSA	Uncharacterized protein. (1890 aa)
	V4LDE3_EUTSA	Autophagy protein 5; Required for autophagy. (340 aa)
	V4LIW7_EUTSA	Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy. (697 aa)
	V4LKH4_EUTSA	Serine/threonine-protein phosphatase. (313 aa)
	V4LLK8_EUTSA	Autophagy-related protein 3. (313 aa)
	V4LNJ3_EUTSA	Autophagy-related protein. (122 aa)
	V4LQR8_EUTSA	Serine/threonine-protein phosphatase. (313 aa)
	V4LU52_EUTSA	Uncharacterized protein. (309 aa)
	V4LUI1_EUTSA	Uncharacterized protein. (1492 aa)
	V4LWB9_EUTSA	WD_REPEATS_REGION domain-containing protein. (305 aa)
	V4LYM4_EUTSA	Autophagy-related protein. (121 aa)
	V4M2U2_EUTSA	WD_REPEATS_REGION domain-containing protein. (1348 aa)
	V4M7Q6_EUTSA	Autophagy-related protein. (115 aa)
	V4MA30_EUTSA	Autophagy_act_C domain-containing protein. (222 aa)
	V4MDB6_EUTSA	Autophagy-related protein. (119 aa)
	V4MDX5_EUTSA	Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (813 aa)
	V4MF34_EUTSA	Autophagy-related protein. (74 aa)
	V4MFU3_EUTSA	ATG11 domain-containing protein. (1149 aa)
	V4MQ13_EUTSA	Autophagy-related protein. (137 aa)
	V4NG54_EUTSA	Protein kinase domain-containing protein. (715 aa)
	V4NIN2_EUTSA	WD_REPEATS_REGION domain-containing protein. (369 aa)
	V4NNI2_EUTSA	ATG13 domain-containing protein. (625 aa)
	V4NRV9_EUTSA	Autophagy-related protein. (119 aa)
	V4NXR4_EUTSA	Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family. (874 aa)

Your Current Organism:

Eutrema salsugineum

NCBI taxonomy Id: 72664
Other names: Arabidopsis salsuginea, E. salsugineum, Eutrema salsugineum (Pall.) Al-Shehbaz & Warwick, 2005, Hesperis salsuginea, Sisymbrium salsugineum, Stenophragma salsugineum, Thellungiella salsuginea, Thelypodium salsugineum, saltwater cress

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
V4KEH6_EUTSA	V4KUZ1_EUTSA	V4KEH6	V4KUZ1	Serine/threonine-protein phosphatase.	Uncharacterized protein.	0.650
V4KEH6_EUTSA	V4KZ00_EUTSA	V4KEH6	V4KZ00	Serine/threonine-protein phosphatase.	Uncharacterized protein.	0.990
V4KEH6_EUTSA	V4L5H7_EUTSA	V4KEH6	V4L5H7	Serine/threonine-protein phosphatase.	ATG13 domain-containing protein.	0.652
V4KEH6_EUTSA	V4MFU3_EUTSA	V4KEH6	V4MFU3	Serine/threonine-protein phosphatase.	ATG11 domain-containing protein.	0.650
V4KEH6_EUTSA	V4NG54_EUTSA	V4KEH6	V4NG54	Serine/threonine-protein phosphatase.	Protein kinase domain-containing protein.	0.665
V4KEH6_EUTSA	V4NNI2_EUTSA	V4KEH6	V4NNI2	Serine/threonine-protein phosphatase.	ATG13 domain-containing protein.	0.652
V4KFR4_EUTSA	V4KKP4_EUTSA	V4KFR4	V4KKP4	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. Belongs to the ATG12 family.	Autophagy-related protein 3.	0.997
V4KFR4_EUTSA	V4KQ66_EUTSA	V4KFR4	V4KQ66	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. Belongs to the ATG12 family.	WD_REPEATS_REGION domain-containing protein.	0.414
V4KFR4_EUTSA	V4KUZ1_EUTSA	V4KFR4	V4KUZ1	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. Belongs to the ATG12 family.	Uncharacterized protein.	0.603
V4KFR4_EUTSA	V4L039_EUTSA	V4KFR4	V4L039	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. Belongs to the ATG12 family.	WD_REPEATS_REGION domain-containing protein.	0.999
V4KFR4_EUTSA	V4L0V2_EUTSA	V4KFR4	V4L0V2	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. Belongs to the ATG12 family.	Uncharacterized protein.	0.909
V4KFR4_EUTSA	V4L1E6_EUTSA	V4KFR4	V4L1E6	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. Belongs to the ATG12 family.	Cysteine protease.	0.511
V4KFR4_EUTSA	V4L5H7_EUTSA	V4KFR4	V4L5H7	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. Belongs to the ATG12 family.	ATG13 domain-containing protein.	0.424
V4KFR4_EUTSA	V4L725_EUTSA	V4KFR4	V4L725	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. Belongs to the ATG12 family.	Autophagy-related protein.	0.687
V4KFR4_EUTSA	V4L7D1_EUTSA	V4KFR4	V4L7D1	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. Belongs to the ATG12 family.	Autophagy-related protein.	0.695
V4KFR4_EUTSA	V4LC48_EUTSA	V4KFR4	V4LC48	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. Belongs to the ATG12 family.	Uncharacterized protein.	0.574
V4KFR4_EUTSA	V4LDE3_EUTSA	V4KFR4	V4LDE3	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. Belongs to the ATG12 family.	Autophagy protein 5; Required for autophagy.	0.999
V4KFR4_EUTSA	V4LIW7_EUTSA	V4KFR4	V4LIW7	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. Belongs to the ATG12 family.	Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.	0.998
V4KFR4_EUTSA	V4LLK8_EUTSA	V4KFR4	V4LLK8	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. Belongs to the ATG12 family.	Autophagy-related protein 3.	0.997
V4KFR4_EUTSA	V4LNJ3_EUTSA	V4KFR4	V4LNJ3	Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation. Belongs to the ATG12 family.	Autophagy-related protein.	0.687

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