STRINGSTRING
KKB00193.1 KKB00193.1 KKA99433.1 KKA99433.1 KKA98633.1 KKA98633.1 betC_2 betC_2 yteR yteR KKA98643.1 KKA98643.1 KKA98644.1 KKA98644.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
KKB00193.1Hypothetical protein; Broad-specificity glycosaminoglycan lyase. (1016 aa)
KKA99433.1Chondroitinase; Broad-specificity glycosaminoglycan lyase. (990 aa)
KKA98633.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (496 aa)
betC_2Exported sulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (518 aa)
yteRGlycosyl hydrolase family 88; Derived by automated computational analysis using gene prediction method: Protein Homology. (348 aa)
KKA98643.1Sulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (398 aa)
KKA98644.1Arylsulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (540 aa)
Your Current Organism:
Avibacterium paragallinarum
NCBI taxonomy Id: 728
Other names: A. paragallinarum, ATCC 29545, CCUG 12835, CIP 103453, DSM 18554, Haemophilus gallinarum, Haemophilus paragallinarum, NCTC 11296
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.