STRINGSTRING
holA holA dnaX dnaX dnaB dnaB ssb ssb D0Z67_14570 D0Z67_14570 D0Z67_14620 D0Z67_14620 D0Z67_14790 D0Z67_14790 D0Z67_15240 D0Z67_15240 D0Z67_15330 D0Z67_15330 D0Z67_04405 D0Z67_04405 GCA_000725795_05846 GCA_000725795_05846 D0Z67_21280 D0Z67_21280 D0Z67_21155 D0Z67_21155 rnhB rnhB D0Z67_22055 D0Z67_22055 D0Z67_05740 D0Z67_05740 dnaE dnaE D0Z67_29440 D0Z67_29440 ssb-2 ssb-2 D0Z67_29220 D0Z67_29220 D0Z67_07140 D0Z67_07140 D0Z67_06885 D0Z67_06885 polA polA D0Z67_06650 D0Z67_06650 D0Z67_06645 D0Z67_06645 D0Z67_16020 D0Z67_16020 D0Z67_16000 D0Z67_16000 D0Z67_23565 D0Z67_23565 D0Z67_10410 D0Z67_10410 D0Z67_09795 D0Z67_09795 D0Z67_06075 D0Z67_06075 D0Z67_06380 D0Z67_06380 D0Z67_06530 D0Z67_06530 lig lig ligA ligA D0Z67_23215 D0Z67_23215 D0Z67_22825 D0Z67_22825 D0Z67_19390 D0Z67_19390 D0Z67_18675 D0Z67_18675 rnhA rnhA D0Z67_01665 D0Z67_01665 D0Z67_02090 D0Z67_02090 D0Z67_11600 D0Z67_11600 D0Z67_13030 D0Z67_13030 D0Z67_04555 D0Z67_04555 D0Z67_05025 D0Z67_05025 D0Z67_08220 D0Z67_08220 D0Z67_08455 D0Z67_08455 D0Z67_08470 D0Z67_08470 D0Z67_08475 D0Z67_08475 dnaG dnaG
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
holAUnannotated protein. (329 aa)
dnaXUnannotated protein; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. (737 aa)
dnaBUnannotated protein; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. (492 aa)
ssbUnannotated protein. (196 aa)
D0Z67_14570Unannotated protein. (341 aa)
D0Z67_14620Unannotated protein; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of replication [...] (376 aa)
D0Z67_14790Unannotated protein. (303 aa)
D0Z67_15240Unannotated protein. (644 aa)
D0Z67_15330Unannotated protein. (147 aa)
D0Z67_04405Unannotated protein. (451 aa)
GCA_000725795_05846Unannotated protein. (278 aa)
D0Z67_21280Unannotated protein. (402 aa)
D0Z67_21155Unannotated protein; Belongs to the UPF0102 family. (121 aa)
rnhBUnannotated protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (233 aa)
D0Z67_22055Unannotated protein. (177 aa)
D0Z67_05740Unannotated protein. (338 aa)
dnaEUnannotated protein; Belongs to the DNA polymerase type-C family. DnaE2 subfamily. (883 aa)
D0Z67_29440Unannotated protein. (220 aa)
ssb-2Unannotated protein. (178 aa)
D0Z67_29220Unannotated protein. (462 aa)
D0Z67_07140Unannotated protein. (1179 aa)
D0Z67_06885Unannotated protein. (259 aa)
polAUnannotated protein; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. (888 aa)
D0Z67_06650Unannotated protein. (192 aa)
D0Z67_06645Unannotated protein. (585 aa)
D0Z67_16020Unannotated protein. (552 aa)
D0Z67_16000Unannotated protein. (401 aa)
D0Z67_23565Unannotated protein. (505 aa)
D0Z67_10410Unannotated protein. (445 aa)
D0Z67_09795Unannotated protein. (156 aa)
D0Z67_06075Unannotated protein. (327 aa)
D0Z67_06380Unannotated protein. (394 aa)
D0Z67_06530Unannotated protein. (1612 aa)
ligUnannotated protein; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair. (512 aa)
ligAUnannotated protein; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily. (731 aa)
D0Z67_23215Unannotated protein. (241 aa)
D0Z67_22825Unannotated protein. (65 aa)
D0Z67_19390Unannotated protein. (557 aa)
D0Z67_18675Unannotated protein. (441 aa)
rnhAUnannotated protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (233 aa)
D0Z67_01665Unannotated protein. (155 aa)
D0Z67_02090Unannotated protein. (723 aa)
D0Z67_11600Unannotated protein. (212 aa)
D0Z67_13030Unannotated protein. (191 aa)
D0Z67_04555Unannotated protein. (241 aa)
D0Z67_05025Unannotated protein. (301 aa)
D0Z67_08220Unannotated protein. (418 aa)
D0Z67_08455Unannotated protein. (286 aa)
D0Z67_08470Unannotated protein. (192 aa)
D0Z67_08475Unannotated protein. (191 aa)
dnaGUnannotated protein; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (634 aa)
Your Current Organism:
Streptomyces seoulensis
NCBI taxonomy Id: 73044
Other names: CIP 105312, IFO 16255, IFO 16668, IMSNU 21266, JCM 10116, NBRC 16255, NBRC 16668, S. seoulensis, Streptomyces sp. USC028, Streptomyces sp. USC046, strain IMSNU-1
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