STRINGSTRING
GCA_001748285_03110 GCA_001748285_03110 GCA_001748285_03111 GCA_001748285_03111 GCA_001748285_03112 GCA_001748285_03112 GCA_001748285_03113 GCA_001748285_03113 GCA_001748285_03114 GCA_001748285_03114
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GCA_001748285_03110Unannotated protein. (316 aa)
GCA_001748285_03111Unannotated protein. (117 aa)
GCA_001748285_03112Unannotated protein. (92 aa)
GCA_001748285_03113Unannotated protein. (270 aa)
GCA_001748285_03114Unannotated protein. (77 aa)
Your Current Organism:
Thermogemmatispora onikobensis
NCBI taxonomy Id: 732234
Other names: JCM 16817, KCTC 19768, Ktedonobacteria bacterium ONI-1, T. onikobensis, Thermogemmatispora onikobensis Yabe et al. 2011, strain ONI-1
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