(5 nodes) Golgi transport complex, and Intra-Golgi traffic network (Plasmodium yoelii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PY07542	Homo sapiens A_IG002N01.1 gene product, putative. (379 aa)
	PY03434	Uncharacterized protein. (275 aa)
	PY03050	Uncharacterized protein. (1272 aa)
	PY00656	COG2 domain-containing protein. (319 aa)
	PY00655	Uncharacterized protein. (124 aa)

Your Current Organism:

Plasmodium yoelii

NCBI taxonomy Id: 73239
Other names: P. yoelii yoelii, Plasmodium yoelii subsp. yoelii, Plasmodium yoelii yoelii

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PY00655	PY00656	Q7RRR3	Q7RRR2	Uncharacterized protein.	COG2 domain-containing protein.	0.566
PY00655	PY03050	Q7RRR3	Q7RK53	Uncharacterized protein.	Uncharacterized protein.	0.963
PY00655	PY03434	Q7RRR3	Q7RJ30	Uncharacterized protein.	Uncharacterized protein.	0.905
PY00655	PY07542	Q7RRR3	Q7R7P0	Uncharacterized protein.	Homo sapiens A_IG002N01.1 gene product, putative.	0.905
PY00656	PY00655	Q7RRR2	Q7RRR3	COG2 domain-containing protein.	Uncharacterized protein.	0.566
PY00656	PY03050	Q7RRR2	Q7RK53	COG2 domain-containing protein.	Uncharacterized protein.	0.963
PY00656	PY03434	Q7RRR2	Q7RJ30	COG2 domain-containing protein.	Uncharacterized protein.	0.905
PY00656	PY07542	Q7RRR2	Q7R7P0	COG2 domain-containing protein.	Homo sapiens A_IG002N01.1 gene product, putative.	0.905
PY03050	PY00655	Q7RK53	Q7RRR3	Uncharacterized protein.	Uncharacterized protein.	0.963
PY03050	PY00656	Q7RK53	Q7RRR2	Uncharacterized protein.	COG2 domain-containing protein.	0.963
PY03050	PY03434	Q7RK53	Q7RJ30	Uncharacterized protein.	Uncharacterized protein.	0.974
PY03050	PY07542	Q7RK53	Q7R7P0	Uncharacterized protein.	Homo sapiens A_IG002N01.1 gene product, putative.	0.974
PY03434	PY00655	Q7RJ30	Q7RRR3	Uncharacterized protein.	Uncharacterized protein.	0.905
PY03434	PY00656	Q7RJ30	Q7RRR2	Uncharacterized protein.	COG2 domain-containing protein.	0.905
PY03434	PY03050	Q7RJ30	Q7RK53	Uncharacterized protein.	Uncharacterized protein.	0.974
PY03434	PY07542	Q7RJ30	Q7R7P0	Uncharacterized protein.	Homo sapiens A_IG002N01.1 gene product, putative.	0.565
PY07542	PY00655	Q7R7P0	Q7RRR3	Homo sapiens A_IG002N01.1 gene product, putative.	Uncharacterized protein.	0.905
PY07542	PY00656	Q7R7P0	Q7RRR2	Homo sapiens A_IG002N01.1 gene product, putative.	COG2 domain-containing protein.	0.905
PY07542	PY03050	Q7R7P0	Q7RK53	Homo sapiens A_IG002N01.1 gene product, putative.	Uncharacterized protein.	0.974
PY07542	PY03434	Q7R7P0	Q7RJ30	Homo sapiens A_IG002N01.1 gene product, putative.	Uncharacterized protein.	0.565